Home
Strains
S. lividans TK24
Peripherome
Exportome
Membranome
Secretome
Sec
TAT
Type VII
S. coelicolor
S. lividans
TK24 vs
S. coelicolor
Downloads and Tools
STEPdb
SToPS2GO
IDMapping
Downloads
About
Login
View:
S. lividans
TK24 TAT
Export to Excel
Export to CSV
Search
Show all
Advanced Search
Exact phrase
All words
Any word
S. lividans
TK24 TAT
N
Nucleoid (0)
r
Ribosomal (0)
A
Cytoplasmic (0)
F2
Peripheral inner membrane, facing periplasm (1)
E
Inner membrane lipoproteins (0)
P
Peptidoglycan Binding (4)
X
Extra-cellular (156)
B
Integral inner membrane (0)
F1
Peripheral inner membrane, facing cytoplasm (0)
show distribution
Sub-cellular topologies of Streptomyces lividans TK24 proteins
156
# Proteins
TK24
N
0
A
0
r
0
F1
0
B
0
F2
1
E
0
P
4
Secretory
0
X
156
Accession
(Uniprot)
Entry
Name
(Uniprot) (*)
Gene
Name
(Uniprot) (*)
Gene
ID
(Uniprot) (*)
Protein names
(SToPSdb) (*)
Symbol
Level of
evidence
Existing
Rules
Homologous
Protein
in E.coli K-12 (STEPdb) (*)
Sub-cellular
Location
(STEPdb)
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (TAT) - Glucosidase
Localization:
-
Notes:
Experimentally validated (agarase reporter assay); PMID: 20487278
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Experimental
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EGJ2
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
42
Cleavage Score (Cmax):
0.373
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
31
Score:
18.0821
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
Transmembrane, TMs: 1
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Tat signal peptide predicted. Most likely cleavage site: 1- 41 [AGA-AV]
Score:
0.941
Predict Now
D6EGJ2
D6EGJ2_STRLI
SLIV_05185
Secreted protein (Tat) - Glucosidase
X
Experimental
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (TAT) - Putative pectin lyase
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Potential
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EGC1
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
40
Cleavage Score (Cmax):
0.553
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
39
Score:
11.1675
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
Transmembrane, TMs: 1
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Tat signal peptide predicted. Most likely cleavage site: 1- 39 [ASA-QP]
Score:
0.888
Predict Now
D6EGC1
D6EGC1_STRLI
SLIV_36220
Secreted protein (Tat) - Putative pectin lyase
X
Potential
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (TAT) - Glycoside hydrolase family (IPR033400)
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Potential
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EG91
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
33
Cleavage Score (Cmax):
0.308
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
32
Score:
7.58511
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Tat signal peptide predicted. Most likely cleavage site: 1- 38 [VAA-LP]
Score:
0.969
Predict Now
D6EG91
D6EG91_STRLI
SLIV_36080
Secreted protein (Tat) - Glycoside hydrolase family (IPR033400)
X
Potential
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (TAT) - Virulence factor Mce family protein
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Potential
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EFS9
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
28
Cleavage Score (Cmax):
0.145
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
27
Score:
12.6087
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
Transmembrane, TMs: 1
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Tat signal peptide predicted. Most likely cleavage site: 1- 27 [ARA-LG]
Score:
0.794
Predict Now
D6EFS9
D6EFS9_STRLI
SLIV_25620
Secreted protein (Tat) - Virulence factor Mce family protein
X
Potential
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Integral membrane protein - Virulence factor Mce protein (IPR005693)
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Potential
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EFS7
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
No
Cleavage site amino acid:
41
Cleavage Score (Cmax):
0.269
LipoP 1.0
Prediction:
TMH
Cleavage site amino acid:
0
Score:
3.95894
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
Transmembrane, TMs: 1
Phobius
Signal Peptide:
No
Number of TMs:
1
PRED-TAT
Localization:
Tat signal peptide predicted. Most likely cleavage site: 1- 40 [SVA-GT]
Score:
0.864
Predict Now
D6EFS7
D6EFS7_STRLI
SLIV_25610
Secreted protein (Tat) - Virulence factor Mce protein (IPR005693)
X
Potential
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (TAT) - Non-hemolytic phospholipase C (EC 3.1.4.3)
Localization:
-
Notes:
Experimentally validated (agarase reporter assay); PMID: 20487278; PMID: 17093047
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Experimental
Predicted sub-cellular location:
Extra-cellular, Extra-cellular vesicle
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EFC0
SMART database
SMART: plcN
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
30
Cleavage Score (Cmax):
0.252
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
29
Score:
-0.0378342
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Tat signal peptide predicted. Most likely cleavage site: 1- 31 [AAA-LP]
Score:
0.997
Predict Now
D6EFC0
D6EFC0_STRLI
plcN
SLIV_05055
Secreted protein (Tat) - Non-hemolytic phospholipase C (EC 3.1.4.3)
X,V
Experimental
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (TAT) - Copper oxidase
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Potential
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EFA0
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
31
Cleavage Score (Cmax):
0.548
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
30
Score:
9.23765
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Tat signal peptide predicted. Most likely cleavage site: 1- 30 [AGA-AP]
Score:
0.994
Predict Now
D6EFA0
D6EFA0_STRLI
SLIV_04950
Secreted protein (Tat) - Copper oxidase
X
Potential
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (TAT) - Latex clearing protein
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Potential
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EF34
SMART database
SMART: lcp
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
28
Cleavage Score (Cmax):
0.559
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
29
Score:
8.29001
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Tat signal peptide predicted. Most likely cleavage site: 1- 29 [AWA-WP]
Score:
0.971
Predict Now
D6EF34
D6EF34_STRLI
lcp
SLIV_04620
Secreted protein (Tat) - Latex clearing protein
X
Potential
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (TAT) - solute binding protein (IPR006059)
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Potential
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EEW3
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
36
Cleavage Score (Cmax):
0.449
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
35
Score:
14.2051
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Tat signal peptide predicted. Most likely cleavage site: 1- 35 [ASA-DS]
Score:
0.999
Predict Now
D6EEW3
D6EEW3_STRLI
SLIV_35680
Secreted protein (Tat) - solute binding protein (IPR006059)
X
Potential
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (TAT) - Bacterial alpha-L-rhamnosidase
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
By similarity
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EES8
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
No
Cleavage site amino acid:
55
Cleavage Score (Cmax):
0.204
LipoP 1.0
Prediction:
CYT
Cleavage site amino acid:
0
Score:
-0.200913
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
No
Number of TMs:
0
PRED-TAT
Localization:
Tat signal peptide predicted. Most likely cleavage site: 1- 54 [VAA-AG]
Score:
0.994
Predict Now
D6EES8
D6EES8_STRLI
SLIV_35500
Secreted protein (Tat) - Bacterial alpha-L-rhamnosidase
X
By similarity
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (TAT) - Soluble quinoprotein glucose/sorbosone dehydrogenase
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Experimental
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EER0
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
29
Cleavage Score (Cmax):
0.5
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
28
Score:
17.9755
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
Transmembrane, TMs: 1
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Tat signal peptide predicted. Most likely cleavage site: 1- 37 [APA-DI]
Score:
0.877
Predict Now
D6EER0
D6EER0_STRLI
SLIV_35415
Secreted protein (Tat) - Soluble quinoprotein glucose/sorbosone dehydrogenase
X
Experimental
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (TAT) - Glycosyl hydrolase family 109 protein (EC 3.2.1.-)
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Potential
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EEN6
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
35
Cleavage Score (Cmax):
0.325
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
34
Score:
11.1452
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
Transmembrane, TMs: 1
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Tat signal peptide predicted. Most likely cleavage site: 1- 34 [VAA-AE]
Score:
0.996
Predict Now
D6EEN6
D6EEN6_STRLI
SLIV_35300
Secreted protein (Tat) - Glycosyl hydrolase family 109 protein (EC 3.2.1.-)
X
Potential
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (TAT) - Pectate lyase superfamily protein (IPR024535)
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Experimental
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EDM9
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
45
Cleavage Score (Cmax):
0.475
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
35
Score:
19.3472
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
Transmembrane, TMs: 1
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Tat signal peptide predicted. Most likely cleavage site: 1- 35 [AQA-AT]
Score:
0.991
Predict Now
D6EDM9
D6EDM9_STRLI
SLIV_04060
Secreted protein (Tat) - Pectate lyase superfamily protein (IPR024535)
X
Experimental
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (TAT) - Glycosyl hydrolase, five-bladed beta-propellor domain (IPR023296)
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Experimental
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6ED97
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
35
Cleavage Score (Cmax):
0.742
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
34
Score:
12.5258
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Tat signal peptide predicted. Most likely cleavage site: 1- 34 [ASA-AP]
Score:
0.999
Predict Now
D6ED97
D6ED97_STRLI
SLIV_34825
Secreted protein (Tat) - Glycosyl hydrolase, five-bladed beta-propellor domain (IPR023296)
X
Experimental
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (TAT) - Solute-binding family 1 protein (IPR006059)
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Potential
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6ED61
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
26
Cleavage Score (Cmax):
0.353
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
25
Score:
12.727
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Tat signal peptide predicted. Most likely cleavage site: 1- 35 [SSA-RT]
Score:
0.993
Predict Now
D6ED61
D6ED61_STRLI
SLIV_34640
Secreted protein (Tat) - Solute-binding family 1 protein (IPR006059)
X
Potential
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (TAT) - Unknown function
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Experimental
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6ECR6
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
47
Cleavage Score (Cmax):
0.844
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
46
Score:
2.51762
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Tat signal peptide predicted. Most likely cleavage site: 1- 46 [AQA-AD]
Score:
0.661
Predict Now
D6ECR6
D6ECR6_STRLI
SLIV_14330
Secreted protein (Tat) - Unknown function
X
Experimental
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (TAT) - unknown function
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Potential
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6ECQ7
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
32
Cleavage Score (Cmax):
0.743
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
31
Score:
17.6416
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
Transmembrane, TMs: 1
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Tat signal peptide predicted. Most likely cleavage site: 1- 31 [AAA-AD]
Score:
0.997
Predict Now
D6ECQ7
D6ECQ7_STRLI
SLIV_14290
Secreted protein (Tat) - unknown function
X
Potential
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (Sec) - Amidase
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Potential
Predicted sub-cellular location:
Extra-cellular, Peptidoglycan-associated
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EC51
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
34
Cleavage Score (Cmax):
0.355
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
33
Score:
7.62464
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
Transmembrane, TMs: 1
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Tat signal peptide predicted. Most likely cleavage site: 1- 33 [ARA-DM]
Score:
0.966
Predict Now
D6EC51
D6EC51_STRLI
SLIV_03390
Secreted protein (Tat) - Amidase
X,P
Potential
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (TAT) - Chitosanase (EC 3.2.1.132) (CsnA) (EC 3.2.1.123)
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Experimental
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: C9E0E7
SMART database
SMART: csnA
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
41
Cleavage Score (Cmax):
0.31
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
40
Score:
9.58781
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Tat signal peptide predicted. Most likely cleavage site: 1- 40 [AAA-AS]
Score:
0.985
Predict Now
C9E0E7
C9E0E7_STRLI
csnA
SLIV_34555
Secreted protein (Tat) - Chitosanase (EC 3.2.1.132) (CsnA) (EC 3.2.1.123)
X
Experimental
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (TAT) - Galactose-binding domain-like (IPR008979) containing protein
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Experimental
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: A0A076MKM0
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
39
Cleavage Score (Cmax):
0.42
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
37
Score:
4.83642
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Tat signal peptide predicted. Most likely cleavage site: 1- 38 [AAA-AS]
Score:
0.993
Predict Now
A0A076MKM0
A0A076MKM0_STRLI
SLIV_36270
Secreted protein (Tat) - Galactose-binding domain-like (IPR008979) containing protein
X
Experimental
SToPS
First
Previous
1
2
3
4
5
6
7
8
Next
Last
Records 81 to 100 of 157
©2017 Copyright KU Leuven and FORTH/ICE-HT. Last Update: January 2019