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Strains
S. lividans TK24
Peripherome
Exportome
Membranome
Secretome
Sec
TAT
Type VII
S. coelicolor
S. lividans
TK24 vs
S. coelicolor
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S. lividans
TK24 TAT
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S. lividans
TK24 TAT
N
Nucleoid (0)
r
Ribosomal (0)
A
Cytoplasmic (0)
F2
Peripheral inner membrane, facing periplasm (1)
E
Inner membrane lipoproteins (0)
P
Peptidoglycan Binding (4)
X
Extra-cellular (156)
B
Integral inner membrane (0)
F1
Peripheral inner membrane, facing cytoplasm (0)
show distribution
Sub-cellular topologies of Streptomyces lividans TK24 proteins
156
# Proteins
TK24
N
0
A
0
r
0
F1
0
B
0
F2
1
E
0
P
4
Secretory
0
X
156
Accession
(Uniprot)
Entry
Name
(Uniprot) (*)
Gene
Name
(Uniprot) (*)
Gene
ID
(Uniprot) (*)
Protein names
(SToPSdb) (*)
Symbol
Level of
evidence
Existing
Rules
Homologous
Protein
in E.coli K-12 (STEPdb) (*)
Sub-cellular
Location
(STEPdb)
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (TAT) - Lipase 2 (EC 3.1.1.3)
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Potential
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EUD8
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
32
Cleavage Score (Cmax):
0.651
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
31
Score:
14.7515
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Tat signal peptide predicted. Most likely cleavage site: 1- 31 [AHA-AP]
Score:
0.797
Predict Now
D6EUD8
D6EUD8_STRLI
SLIV_01745
Secreted protein (Tat) - Lipase 2 (EC 3.1.1.3)
X
Potential
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (TAT) - Glycoside hydrolase, family 43 (IPR006710)
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Experimental
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EUA9
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
34
Cleavage Score (Cmax):
0.623
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
33
Score:
13.0191
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Tat signal peptide predicted. Most likely cleavage site: 1- 33 [AQA-AP]
Score:
0.953
Predict Now
D6EUA9
D6EUA9_STRLI
SLIV_01600
Secreted protein (Tat) - Glycoside hydrolase, family 43 (IPR006710)
X
Experimental
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (TAT) - Lipid/polyisoprenoid-binding, YceI-like protein (IPR007372)
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Potential
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EU38
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
No
Cleavage site amino acid:
40
Cleavage Score (Cmax):
0.174
LipoP 1.0
Prediction:
CYT
Cleavage site amino acid:
0
Score:
-0.200913
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
No
Number of TMs:
0
PRED-TAT
Localization:
Tat signal peptide predicted. Most likely cleavage site: 1- 32 [ALA-TP]
Score:
0.837
Predict Now
D6EU38
D6EU38_STRLI
SLIV_01255
Secreted protein (Tat) - Lipid/polyisoprenoid-binding, YceI-like protein (IPR007372)
X
Potential
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Integral membrane protein - Phosphatidic acid phosphatase type 2/haloperoxidase
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
By similarity
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EU08
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
No
Cleavage site amino acid:
20
Cleavage Score (Cmax):
0.143
LipoP 1.0
Prediction:
CYT
Cleavage site amino acid:
0
Score:
-0.200913
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
No
Number of TMs:
0
PRED-TAT
Localization:
Tat signal peptide predicted. Most likely cleavage site: 1- 60 [AVA-AT]
Score:
0.929
Predict Now
D6EU08
D6EU08_STRLI
SLIV_32555
Secreted protein (Tat) - Putative phosphatidic acid phosphatase type 2/haloperoxidase
X
By similarity
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (Sec) - Phospholipase A2 domain protein (IPR016090)
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Experimental
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EU07
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
45
Cleavage Score (Cmax):
0.292
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
41
Score:
9.23071
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Tat signal peptide predicted. Most likely cleavage site: 1- 41 [AAA-AD]
Score:
0.976
Predict Now
D6EU07
D6EU07_STRLI
SLIV_32550
Secreted protein (Tat) - Putative Phospholipase A2
X
Experimental
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (TAT) - Sugar transport sugar binding protein of Solute-binding family 1 (IPR006059)
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Potential
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6ETZ1
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
33
Cleavage Score (Cmax):
0.164
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
30
Score:
11.6084
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Tat signal peptide predicted. Most likely cleavage site: 1- 51 [ASA-KG]
Score:
0.979
Predict Now
D6ETZ1
D6ETZ1_STRLI
SLIV_32470
Secreted protein (Tat) - Sugar transport sugar binding protein of Solute-binding family 1 (IPR006059)
X
Potential
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (TAT) - unknown function
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Experimental
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6ETV3
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
36
Cleavage Score (Cmax):
0.609
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
35
Score:
22.4169
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
Transmembrane, TMs: 1
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Tat signal peptide predicted. Most likely cleavage site: 1- 35 [AVA-TP]
Score:
0.855
Predict Now
D6ETV3
D6ETV3_STRLI
SLIV_32275
Secreted protein (Tat) - unknown function
X
Experimental
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (TAT) - Pectate lyase
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Potential
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6ETU8
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
38
Cleavage Score (Cmax):
0.756
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
37
Score:
20.2484
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
Transmembrane, TMs: 1
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Tat signal peptide predicted. Most likely cleavage site: 1- 37 [AQA-AT]
Score:
0.749
Predict Now
D6ETU8
D6ETU8_STRLI
SLIV_32250
Secreted protein (Tat) - Pectate lyase
X
Potential
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Lactonase, 7-bladed beta propeller family protein (IPR019405)
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Potential
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6ETU0
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
No
Cleavage site amino acid:
36
Cleavage Score (Cmax):
0.269
LipoP 1.0
Prediction:
TMH
Cleavage site amino acid:
0
Score:
1.84458
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
No
Number of TMs:
0
PRED-TAT
Localization:
Tat signal peptide predicted. Most likely cleavage site: 1- 35 [SGA-LT]
Score:
0.964
Predict Now
D6ETU0
D6ETU0_STRLI
SLIV_32215
Secreted protein (Tat) - Lactonase, 7-bladed beta propeller family protein (IPR019405)
X
Potential
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (TAT) - Putative xanthine dehydrogenase FAD-binding subunit (EC 1.17.1.4)
Localization:
-
Notes:
Putative TAT (piggy-back) secreted protein, based on homology with E.coli K-12 yagG.
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Potential
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6ETS4
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
No
Cleavage site amino acid:
21
Cleavage Score (Cmax):
0.11
LipoP 1.0
Prediction:
CYT
Cleavage site amino acid:
0
Score:
-0.200913
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
No
Number of TMs:
0
PRED-TAT
Localization:
No signal peptide predicted
Score:
0.98
Predict Now
D6ETS4
D6ETS4_STRLI
SLIV_32135
Secreted protein (Tat) - Putative xanthine dehydrogenase FAD-binding subunit (EC 1.17.1.4)
X
Potential
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (TAT) - Neutral zinc metalloprotease
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Experimental
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6ET24
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
50
Cleavage Score (Cmax):
0.518
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
44
Score:
16.7925
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
Transmembrane, TMs: 1
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Tat signal peptide predicted. Most likely cleavage site: 1- 49 [ATA-AP]
Score:
0.997
Predict Now
D6ET24
D6ET24_STRLI
SLIV_11270
Secreted protein (Tat) - Neutral zinc metalloprotease
X
Experimental
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (TAT) - Unknown function
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Experimental
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6ET10
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
43
Cleavage Score (Cmax):
0.247
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
27
Score:
18.4954
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
Transmembrane, TMs: 1
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Tat signal peptide predicted. Most likely cleavage site: 1- 42 [AKA-AP]
Score:
0.715
Predict Now
D6ET10
D6ET10_STRLI
SLIV_11200
Secreted protein (Tat) - Unknown function
X
Experimental
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (TAT) - N-acetylmuramoyl-L-alanine amidase
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Experimental
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6ESY4
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
No
Cleavage site amino acid:
49
Cleavage Score (Cmax):
0.245
LipoP 1.0
Prediction:
CYT
Cleavage site amino acid:
0
Score:
-0.200913
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
No
Number of TMs:
0
PRED-TAT
Localization:
Tat signal peptide predicted. Most likely cleavage site: 1- 48 [VLA-RD]
Score:
1
Predict Now
D6ESY4
D6ESY4_STRLI
SLIV_11070
Secreted protein (Tat) - N-acetylmuramoyl-L-alanine amidase
X
Experimental
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (TAT) - Protein with Lysyl oxidase domain (IPR001695)
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Experimental
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6ESU5
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
40
Cleavage Score (Cmax):
0.827
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
31
Score:
17.6313
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
Transmembrane, TMs: 1
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Sec signal peptide predicted. Most likely cleavage site: 1- 39 [AKA-AT]
Score:
0.988
Predict Now
D6ESU5
D6ESU5_STRLI
SLIV_01030
Secreted protein (Tat) - Protein with Lysyl oxidase domain (IPR001695)
X
Experimental
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (TAT) - Amidase
Localization:
-
Notes:
Experimentally validated (agarase reporter assay); PMID: 17093047
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Experimental
Predicted sub-cellular location:
Extra-cellular, Peptidoglycan-associated
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6ESI4
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
37
Cleavage Score (Cmax):
0.262
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
35
Score:
5.04519
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Tat signal peptide predicted. Most likely cleavage site: 1- 36 [AAA-QV]
Score:
0.991
Predict Now
D6ESI4
D6ESI4_STRLI
SLIV_31940
Secreted protein (Tat) - Amidase
X,P
Experimental
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (TAT) - Putative phosphodiesterase (IPR017946)
Localization:
-
Notes:
Experimentally validated (agarase reporter assay); PMID: 20487278; PMID: 17093047
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Experimental
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6ESG0
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
31
Cleavage Score (Cmax):
0.647
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
30
Score:
10.9467
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Tat signal peptide predicted. Most likely cleavage site: 1- 30 [ALA-SQ]
Score:
0.959
Predict Now
D6ESG0
D6ESG0_STRLI
SLIV_31815
Secreted protein (Tat) - Putative phosphodiesterase (IPR017946)
X
Experimental
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (TAT) - unknown function
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Experimental
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6ES26
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
38
Cleavage Score (Cmax):
0.597
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
37
Score:
10.4815
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
Transmembrane, TMs: 1
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Tat signal peptide predicted. Most likely cleavage site: 1- 37 [AGA-AE]
Score:
1
Predict Now
D6ES26
D6ES26_STRLI
SLIV_21470
Secreted protein (Tat) - unknown function
X
Experimental
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted lipoprotein (TAT) - Glucose/Sorbosone dehydrogenase (IPR012938)
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Experimental
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6ERR6
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
No
Cleavage site amino acid:
29
Cleavage Score (Cmax):
0.196
LipoP 1.0
Prediction:
CYT
Cleavage site amino acid:
0
Score:
-0.200913
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
No
Number of TMs:
0
PRED-TAT
Localization:
Tat signal peptide predicted. Most likely cleavage site: 1- 85 [SDG-AD]
Score:
0.728
Predict Now
D6ERR6
D6ERR6_STRLI
SLIV_10965
Secreted protein (Tat) - Glucose/Sorbosone dehydrogenase (IPR012938)
X
Experimental
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (TAT) - Alkaline phosphatase
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Potential
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6ER63
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
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Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
38
Cleavage Score (Cmax):
0.385
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
37
Score:
11.8965
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Tat signal peptide predicted. Most likely cleavage site: 1- 37 [AFA-RS]
Score:
0.997
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D6ER63
D6ER63_STRLI
SLIV_31340
Secreted protein (Tat) - Alkaline phosphatase
X
Potential
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted lipoprotein (TAT) - Rieske iron-sulphur protein (IPR014349)
Localization:
-
Notes:
Experimentally validated (agarase reporter assay); PMID: 17093047
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Experimental
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EQZ0
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
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Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
41
Cleavage Score (Cmax):
0.185
LipoP 1.0
Prediction:
SpII
Cleavage site amino acid:
32
Score:
12.518
Cleavage Rule:
Pos+2=S
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Tat signal peptide predicted. Most likely cleavage site: 1- 36 [SDS-DD]
Score:
0.923
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D6EQZ0
D6EQZ0_STRLI
SLIV_30995
Secreted protein (Tat) - Rieske iron-sulphur protein (IPR014349)
X
Experimental
SToPS
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©2017 Copyright KU Leuven and FORTH/ICE-HT. Last Update: January 2019