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Strains
S. lividans TK24
Peripherome
Exportome
Membranome
Secretome
Sec
TAT
Type VII
S. coelicolor
S. lividans
TK24 vs
S. coelicolor
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S. lividans
TK24 Sec
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S. lividans
TK24 Sec
N
Nucleoid (0)
r
Ribosomal (0)
A
Cytoplasmic (0)
F2
Peripheral inner membrane, facing periplasm (0)
E
Inner membrane lipoproteins (156)
P
Peptidoglycan Binding (21)
X
Extra-cellular (416)
B
Integral inner membrane (0)
F1
Peripheral inner membrane, facing cytoplasm (0)
show distribution
Sub-cellular topologies of Streptomyces lividans TK24 proteins
416
# Proteins
TK24
N
0
A
0
r
0
F1
0
B
0
F2
0
E
156
P
21
Secretory
0
X
416
Accession
(Uniprot)
Entry
Name
(Uniprot) (*)
Gene
Name
(Uniprot) (*)
Gene
ID
(Uniprot) (*)
Protein names
(SToPSdb) (*)
Symbol
Level of
evidence
Existing
Rules
Homologous
Protein
in E.coli K-12 (STEPdb) (*)
Sub-cellular
Location
(STEPdb)
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (Sec) - Uncharacterized protein
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Potential
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: A0A076M427
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
38
Cleavage Score (Cmax):
0.742
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
37
Score:
7.52863
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
Transmembrane, TMs: 1
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Sec signal peptide predicted. Most likely cleavage site: 10- 37 [AVA-AG]
Score:
0.926
Predict Now
A0A076M427
A0A076M427_STRLI
SLIV_07520
Secreted protein (Sec) - Uncharacterized protein
X
Potential
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted Lipoprotein (Sec) - Deacetylase
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Experimental
Predicted sub-cellular location:
Secreted lipoprotein
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: A0A076M3Y1
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
49
Cleavage Score (Cmax):
0.281
LipoP 1.0
Prediction:
SpII
Cleavage site amino acid:
33
Score:
14.583
Cleavage Rule:
Pos+2=T
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Sec signal peptide predicted. Most likely cleavage site: 1- 53 [AQA-AD]
Score:
0.991
Predict Now
A0A076M3Y1
A0A076M3Y1_STRLI
SLIV_07245
Secreted Lipoprotein (Sec) - Deacetylase
E
Experimental
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (Sec) - Ser/Thr protein kinase with Concanavalin A-like lectin/glucanase domain (IPR013320)
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Experimental
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: A0A076M3V3
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
49
Cleavage Score (Cmax):
0.406
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
48
Score:
6.66229
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
Transmembrane, TMs: 1
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Sec signal peptide predicted. Most likely cleavage site: 1- 48 [AVA-AP]
Score:
0.942
Predict Now
A0A076M3V3
A0A076M3V3_STRLI
SLIV_07045
Secreted protein (Sec) - Ser/Thr protein kinase with Concanavalin A-like lectin/glucanase domain (IPR013320)
X
Experimental
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (Sec) - Mannan endo-1,4-beta-mannosidase (EC 3.2.1.78)
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Experimental
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: A0A076M3U4
SMART database
SMART: celA
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
37
Cleavage Score (Cmax):
0.492
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
27
Score:
16.3679
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
Transmembrane, TMs: 1
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Sec signal peptide predicted. Most likely cleavage site: 1- 36 [AEA-AA]
Score:
0.985
Predict Now
A0A076M3U4
A0A076M3U4_STRLI
celA
SLIV_06970
Secreted protein (Sec) - Mannan endo-1,4-beta-mannosidase (EC 3.2.1.78)
X
Experimental
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (Sec) - Peptidase, Leupeptin-inactivating enzyme 2
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Potential
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: A0A076M3T6
SMART database
SMART: lieB1
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
32
Cleavage Score (Cmax):
0.547
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
25
Score:
21.0959
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
Transmembrane, TMs: 1
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Sec signal peptide predicted. Most likely cleavage site: 1- 25 [AVA-AG]
Score:
0.984
Predict Now
A0A076M3T6
A0A076M3T6_STRLI
lieB1
SLIV_13170
Secreted protein (Sec) - Peptidase, Leupeptin-inactivating enzyme 2
X
Potential
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (Sec) - Unknown function
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Potential
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: A0A076M3S3
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
28
Cleavage Score (Cmax):
0.497
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
26
Score:
19.2906
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Sec signal peptide predicted. Most likely cleavage site: 1- 26 [VAA-AD]
Score:
0.969
Predict Now
A0A076M3S3
A0A076M3S3_STRLI
SLIV_24145
Secreted protein (Sec) - Unknown function
X
Potential
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted Lipoprotein (Sec) - Lipoprotein localisation LolA/LolB/LppX-like protein (IPR029046)
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Experimental
Predicted sub-cellular location:
Secreted lipoprotein
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: A0A076M3Q5
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
32
Cleavage Score (Cmax):
0.227
LipoP 1.0
Prediction:
SpII
Cleavage site amino acid:
22
Score:
17.2016
Cleavage Rule:
Pos+2=G
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Sec signal peptide predicted. Most likely cleavage site: 1- 30 [AKT-AA]
Score:
0.97
Predict Now
A0A076M3Q5
A0A076M3Q5_STRLI
SLIV_24045
Secreted Lipoprotein (Sec) - Putative lipoprotein localisation LolA/LolB/LppX-like protein (IPR029046)
E
Experimental
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (TAT) - Uncharacterized
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Potential
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: A0A076M3H5
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
25
Cleavage Score (Cmax):
0.455
LipoP 1.0
Prediction:
CYT
Cleavage site amino acid:
0
Score:
-0.200913
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
Transmembrane, TMs: 1
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Sec signal peptide predicted. Most likely cleavage site: 1- 24 [SWA-QT]
Score:
0.997
Predict Now
A0A076M3H5
A0A076M3H5_STRLI
SLIV_23535
Secreted protein (Sec) - Uncharacterized
X
Potential
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (Sec) - Uncharacterized protein
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Potential
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: A0A076M3F4
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
37
Cleavage Score (Cmax):
0.491
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
36
Score:
5.05577
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
Transmembrane, TMs: 2
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Sec signal peptide predicted. Most likely cleavage site: 1- 36 [ALA-AT]
Score:
0.989
Predict Now
A0A076M3F4
A0A076M3F4_STRLI
SLIV_23395
Secreted protein (Sec) - Uncharacterized protein
X
Potential
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted Lipoprotein (Sec) - Unknown function
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Potential
Predicted sub-cellular location:
Secreted lipoprotein
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: A0A076M3E4
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
23
Cleavage Score (Cmax):
0.159
LipoP 1.0
Prediction:
SpII
Cleavage site amino acid:
30
Score:
14.4547
Cleavage Rule:
Pos+2=S
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Sec signal peptide predicted. Most likely cleavage site: 1- 33 [CSS-ED]
Score:
0.98
Predict Now
A0A076M3E4
A0A076M3E4_STRLI
SLIV_12605
Secreted Lipoprotein (Sec) - Unknown function
E
Potential
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (Sec) - Histidine kinase-like ATPase
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Experimental
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: A0A076M3D7
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
20
Cleavage Score (Cmax):
0.32
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
19
Score:
0.50502
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
Transmembrane, TMs: 1
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Sec signal peptide predicted. Most likely cleavage site: 1- 19 [AGA-AW]
Score:
0.996
Predict Now
A0A076M3D7
A0A076M3D7_STRLI
SLIV_23290
Secreted protein (Sec) - Histidine kinase-like ATPase
X
Experimental
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (Sec) - Uncharacterized protein
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Potential
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: A0A076M396
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
28
Cleavage Score (Cmax):
0.331
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
26
Score:
24.9022
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
Transmembrane, TMs: 1
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Sec signal peptide predicted. Most likely cleavage site: 1- 71 [AAA-RV]
Score:
0.958
Predict Now
A0A076M396
A0A076M396_STRLI
SLIV_05820
Secreted protein (Sec) - Uncharacterized protein
X
Potential
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (Sec) - Neuramidase
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Potential
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: A0A076M365
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
30
Cleavage Score (Cmax):
0.578
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
29
Score:
17.3062
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Sec signal peptide predicted. Most likely cleavage site: 1- 29 [AHA-RP]
Score:
1
Predict Now
A0A076M365
A0A076M365_STRLI
SLIV_05645
Secreted protein (Sec) - Neuramidase
X
Potential
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted Lipoprotein (Sec) - Solute binding lipoprotein
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Experimental
Predicted sub-cellular location:
Secreted lipoprotein
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: A0A076M305
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
33
Cleavage Score (Cmax):
0.26
LipoP 1.0
Prediction:
SpII
Cleavage site amino acid:
21
Score:
16.1403
Cleavage Rule:
Pos+2=F
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Sec signal peptide predicted. Most likely cleavage site: 1- 24 [CFA-SG]
Score:
0.993
Predict Now
A0A076M305
A0A076M305_STRLI
SLIV_05285
Secreted Lipoprotein (Sec) - Solute binding lipoprotein
E
Experimental
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted Lipoprotein (Sec) - L,D-transpeptidase
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Experimental
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: A0A076M2U8
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
29
Cleavage Score (Cmax):
0.157
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
26
Score:
11.043
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Sec signal peptide predicted. Most likely cleavage site: 1- 28 [AGA-TG]
Score:
0.992
Predict Now
A0A076M2U8
A0A076M2U8_STRLI
SLIV_11220
Secreted protein (Sec) - L,D-transpeptidase
X
Experimental
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (Sec) - Zinc D-Ala-D-Ala carboxypeptidase (EC 3.4.17.14)
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Experimental
Predicted sub-cellular location:
Extra-cellular, Peptidoglycan-associated
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: A0A076M2T6
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
33
Cleavage Score (Cmax):
0.643
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
32
Score:
18.9234
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
Transmembrane, TMs: 1
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Sec signal peptide predicted. Most likely cleavage site: 1- 32 [AHA-DS]
Score:
0.993
Predict Now
A0A076M2T6
A0A076M2T6_STRLI
SLIV_11170
Secreted protein (Sec) - Zinc D-Ala-D-Ala carboxypeptidase (EC 3.4.17.14)
X,P
Experimental
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (TAT) - Uncharacterized
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Potential
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: A0A076M2R9
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
62
Cleavage Score (Cmax):
0.237
LipoP 1.0
Prediction:
CYT
Cleavage site amino acid:
0
Score:
-0.200913
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
Transmembrane, TMs: 1
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
No signal peptide predicted
Score:
0.086
Predict Now
A0A076M2R9
A0A076M2R9_STRLI
SLIV_22295
Secreted protein (Sec) - Uncharacterized protein
X
Potential
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (Sec) - Unknown function
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Potential
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: A0A076M2R1
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
29
Cleavage Score (Cmax):
0.146
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
18
Score:
-0.0920035
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Sec signal peptide predicted. Most likely cleavage site: 1- 18 [AAA-EP]
Score:
0.997
Predict Now
A0A076M2R1
A0A076M2R1_STRLI
SLIV_04930
Secreted protein (Sec) - Unknown function
X
Potential
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (Sec) - Metallopeptidase
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Experimental
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: A0A076M2N8
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
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Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
25
Cleavage Score (Cmax):
0.428
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
24
Score:
17.966
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
Transmembrane, TMs: 1
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Sec signal peptide predicted. Most likely cleavage site: 1- 26 [AAA-HS]
Score:
0.987
Predict Now
A0A076M2N8
A0A076M2N8_STRLI
SLIV_04830
Secreted protein (Sec) - Metallopeptidase
X
Experimental
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted Lipoprotein (Sec) - L,D-transpeptidase
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Experimental
Predicted sub-cellular location:
Secreted lipoprotein
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: A0A076M2L9
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
No
Cleavage site amino acid:
51
Cleavage Score (Cmax):
0.155
LipoP 1.0
Prediction:
SpII
Cleavage site amino acid:
39
Score:
2.49396
Cleavage Rule:
Pos+2=G
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
No
Number of TMs:
0
PRED-TAT
Localization:
TM segment predicted: 25-45
Score:
0.944
Predict Now
A0A076M2L9
A0A076M2L9_STRLI
SLIV_11215
Secreted Lipoprotein (Sec) - L,D-transpeptidase
E
Experimental
SToPS
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©2017 Copyright KU Leuven and FORTH/ICE-HT. Last Update: January 2019