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Strains
S. lividans TK24
Peripherome
Exportome
Membranome
Secretome
Sec
TAT
Type VII
S. coelicolor
S. lividans
TK24 vs
S. coelicolor
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S. lividans
TK24 Sec
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S. lividans
TK24 Sec
N
Nucleoid (0)
r
Ribosomal (0)
A
Cytoplasmic (0)
F2
Peripheral inner membrane, facing periplasm (0)
E
Inner membrane lipoproteins (156)
P
Peptidoglycan Binding (21)
X
Extra-cellular (416)
B
Integral inner membrane (0)
F1
Peripheral inner membrane, facing cytoplasm (0)
show distribution
Sub-cellular topologies of Streptomyces lividans TK24 proteins
416
# Proteins
TK24
N
0
A
0
r
0
F1
0
B
0
F2
0
E
156
P
21
Secretory
0
X
416
Accession
(Uniprot)
Entry
Name
(Uniprot) (*)
Gene
Name
(Uniprot) (*)
Gene
ID
(Uniprot) (*)
Protein names
(SToPSdb) (*)
Symbol
Level of
evidence
Existing
Rules
Homologous
Protein
in E.coli K-12 (STEPdb) (*)
Sub-cellular
Location
(STEPdb)
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (Sec) - Lipase EstA/Esterase EstB (IPR002918)
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Potential
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: A0A076M6P9
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
31
Cleavage Score (Cmax):
0.682
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
30
Score:
23.2445
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
Transmembrane, TMs: 1
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Sec signal peptide predicted. Most likely cleavage site: 1- 30 [ATA-AP]
Score:
0.99
Predict Now
A0A076M6P9
A0A076M6P9_STRLI
SLIV_29070
Secreted protein (Sec) - Lipase EstA/Esterase EstB (IPR002918)
X
Potential
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (Sec) - Polyketide cyclase SnoaL-like protein
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Potential
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: A0A076M6N5
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
37
Cleavage Score (Cmax):
0.223
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
36
Score:
15.4763
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
Transmembrane, TMs: 1
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Sec signal peptide predicted. Most likely cleavage site: 1- 36 [AWA-GQ]
Score:
0.994
Predict Now
A0A076M6N5
A0A076M6N5_STRLI
SLIV_25645
Secreted protein (Sec) - Polyketide cyclase SnoaL-like protein
X
Potential
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (Sec) - Unknown function (DUF4232 family)
Localization:
-
Notes:
Topology assigned based on protein family (DUF4232 family). Not clear lipoprotein signal peptide.
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Experimental
Predicted sub-cellular location:
Secreted lipoprotein
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: A0A076M6N3
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
51
Cleavage Score (Cmax):
0.245
LipoP 1.0
Prediction:
SpII
Cleavage site amino acid:
24
Score:
15.0947
Cleavage Rule:
Pos+2=G
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Sec signal peptide predicted. Most likely cleavage site: 1- 50 [AAA-DD]
Score:
0.928
Predict Now
A0A076M6N3
A0A076M6N3_STRLI
SLIV_18415
Secreted Lipoprotein (Sec) - Unknown function (DUF4232 family)
E
Experimental
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (Sec) - Unknown function
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Experimental
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: A0A076M6I4
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
26
Cleavage Score (Cmax):
0.121
LipoP 1.0
Prediction:
CYT
Cleavage site amino acid:
0
Score:
-0.200913
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Sec signal peptide predicted. Most likely cleavage site: 1- 21 [TKA-GR]
Score:
0.988
Predict Now
A0A076M6I4
A0A076M6I4_STRLI
SLIV_25380
Secreted protein (Sec) - Unknown function
X
Experimental
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted Lipoprotein (Sec) - Putative CO dehydrogenase flavoprotein-like protein (IPR016169) involved in the biosynthesis of numerous isoquinoline alkaloids (IPR012951)
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Experimental
Predicted sub-cellular location:
Secreted lipoprotein
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: A0A076M6E7
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
34
Cleavage Score (Cmax):
0.141
LipoP 1.0
Prediction:
SpII
Cleavage site amino acid:
21
Score:
20.1437
Cleavage Rule:
Pos+2=T
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Tat signal peptide predicted. Most likely cleavage site: 1- 66 [ALA-KS]
Score:
0.912
Predict Now
A0A076M6E7
A0A076M6E7_STRLI
SLIV_17715
Secreted Lipoprotein (Sec) - Putative CO dehydrogenase flavoprotein-like protein (IPR016169) involved in the biosynthesis of numerous isoquinoline alkaloids (IPR012951)
E
Experimental
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (Sec) - Unknown function
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Potential
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: A0A076M6B7
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
23
Cleavage Score (Cmax):
0.334
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
22
Score:
15.4359
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Sec signal peptide predicted. Most likely cleavage site: 1- 22 [AGA-AG]
Score:
0.97
Predict Now
A0A076M6B7
A0A076M6B7_STRLI
SLIV_17825
Secreted protein (Sec) - Unknown function
X
Potential
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (Sec) - Unknown function
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Potential
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: A0A076M5Y9
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
No
Cleavage site amino acid:
64
Cleavage Score (Cmax):
0.288
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
27
Score:
6.81298
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
No
Number of TMs:
0
PRED-TAT
Localization:
Sec signal peptide predicted. Most likely cleavage site: 1- 63 [AAA-AT]
Score:
0.895
Predict Now
A0A076M5Y9
A0A076M5Y9_STRLI
SLIV_17140
Secreted protein (Sec) - Unknown function
X
Potential
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (Sec) - Thiamine ABC transporter periplasmic binding protein (IPR005948)
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Experimental
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: A0A076M5X6
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
66
Cleavage Score (Cmax):
0.142
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
39
Score:
14.1024
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Sec signal peptide predicted. Most likely cleavage site: 1- 36 [TLA-AC]
Score:
0.972
Predict Now
A0A076M5X6
A0A076M5X6_STRLI
SLIV_10395
Secreted protein (Sec) - Thiamine ABC transporter periplasmic binding protein (IPR005948)
X
Experimental
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted Lipoprotein (Sec) - Unknown function
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Potential
Predicted sub-cellular location:
Secreted lipoprotein
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: A0A076M5W9
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
32
Cleavage Score (Cmax):
0.183
LipoP 1.0
Prediction:
SpII
Cleavage site amino acid:
20
Score:
23.1731
Cleavage Rule:
Pos+2=S
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Sec signal peptide predicted. Most likely cleavage site: 1- 24 [SSS-EG]
Score:
0.985
Predict Now
A0A076M5W9
A0A076M5W9_STRLI
SLIV_24280
Secreted Lipoprotein (Sec) - Unknown function
E
Potential
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted Lipoprotein (Sec) - Solute-binding protein
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Experimental
Predicted sub-cellular location:
Secreted lipoprotein
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: A0A076M5V4
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
40
Cleavage Score (Cmax):
0.15
LipoP 1.0
Prediction:
SpII
Cleavage site amino acid:
23
Score:
14.3621
Cleavage Rule:
Pos+2=G
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Sec signal peptide predicted. Most likely cleavage site: 1- 27 [GLT-GD]
Score:
0.951
Predict Now
A0A076M5V4
A0A076M5V4_STRLI
SLIV_16965
Secreted Lipoprotein (Sec) - Solute-binding protein
E
Experimental
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (Sec) - Unknown function containing DUF320 domain
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Potential
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: A0A076M5V1
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
28
Cleavage Score (Cmax):
0.624
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
27
Score:
16.5468
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
Transmembrane, TMs: 1
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Sec signal peptide predicted. Most likely cleavage site: 1- 27 [AMA-DA]
Score:
0.99
Predict Now
A0A076M5V1
A0A076M5V1_STRLI
SLIV_24175
Secreted protein (Sec) - Unknown function containing DUF320 domain
X
Potential
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (Sec) - Glycosyl hydrolase family 26 protein
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Potential
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: A0A076M5U1
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
41
Cleavage Score (Cmax):
0.406
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
35
Score:
16.1365
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
Transmembrane, TMs: 1
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Tat signal peptide predicted. Most likely cleavage site: 1- 40 [ESA-AP]
Score:
0.952
Predict Now
A0A076M5U1
A0A076M5U1_STRLI
SLIV_24100
Secreted protein (Sec) - Glycosyl hydrolase family 26 protein
X
Potential
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (Sec) - Unknown function
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Potential
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: A0A076M5L6
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
33
Cleavage Score (Cmax):
0.204
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
32
Score:
8.07214
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Sec signal peptide predicted. Most likely cleavage site: 1- 32 [CGG-EE]
Score:
0.991
Predict Now
A0A076M5L6
A0A076M5L6_STRLI
SLIV_10020
Secreted protein (Sec) - Unknown function
X
Potential
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (Sec) - Unknown function
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Potential
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: A0A076M5K3
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
44
Cleavage Score (Cmax):
0.255
LipoP 1.0
Prediction:
TMH
Cleavage site amino acid:
0
Score:
9.71393
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
TM segment predicted: 11-31
Score:
0.582
Predict Now
A0A076M5K3
A0A076M5K3_STRLI
SLIV_16130
Secreted protein (Sec) - Unknown function
X
Potential
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (Sec) - Unknown function containing endopeptidase, NLPC/P60 (IPR000064) and peptidoglycan binding-like (IPR002477) domains
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Potential
Predicted sub-cellular location:
Extra-cellular, Peptidoglycan-associated
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: A0A076M5I9
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
No
Cleavage site amino acid:
65
Cleavage Score (Cmax):
0.225
LipoP 1.0
Prediction:
CYT
Cleavage site amino acid:
0
Score:
-0.200913
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
No
Number of TMs:
0
PRED-TAT
Localization:
Sec signal peptide predicted. Most likely cleavage site: 42- 71 [AHA-AH]
Score:
0.94
Predict Now
A0A076M5I9
A0A076M5I9_STRLI
SLIV_23485
Secreted protein (Sec) - Unknown function containing peptidoglycan binding-like domain
X,P
Potential
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (Sec) - Carboxy-terminal processing protease
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Experimental
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: A0A076M538
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
32
Cleavage Score (Cmax):
0.297
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
31
Score:
4.56149
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
Transmembrane, TMs: 1
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Sec signal peptide predicted. Most likely cleavage site: 1- 31 [AGA-AS]
Score:
0.947
Predict Now
A0A076M538
A0A076M538_STRLI
SLIV_22865
Secreted protein (Sec) - Carboxy-terminal processing protease
X
Experimental
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (Sec) - Streptogrisin-C (EC 3.4.21.-)
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Potential
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: A0A076M515
SMART database
SMART: sprC1
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
33
Cleavage Score (Cmax):
0.292
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
32
Score:
16.3559
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
Transmembrane, TMs: 1
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Sec signal peptide predicted. Most likely cleavage site: 1- 32 [ASA-GT]
Score:
0.97
Predict Now
A0A076M515
A0A076M515_STRLI
sprC1
SLIV_14985
Secreted protein (Sec) - Streptogrisin-C (EC 3.4.21.-)
X
Potential
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (Sec) - Peptidase, Leupeptin-inactivating enzyme 1
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Experimental
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: A0A076M4W0
SMART database
SMART: lieA
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
30
Cleavage Score (Cmax):
0.422
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
29
Score:
12.8934
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Sec signal peptide predicted. Most likely cleavage site: 1- 47 [AAA-AP]
Score:
0.986
Predict Now
A0A076M4W0
A0A076M4W0_STRLI
lieA
SLIV_15325
Secreted protein (Sec) - Peptidase, Leupeptin-inactivating enzyme 1
X
Experimental
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted Lipoprotein (Sec) - Unknown function (DUF3558 family)
Localization:
-
Notes:
assigned to lipoprotein because of SpII - uniprot assigned integral membrane topology
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Experimental
Predicted sub-cellular location:
Secreted lipoprotein
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: A0A076M4I0
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
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Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
No
Cleavage site amino acid:
53
Cleavage Score (Cmax):
0.316
LipoP 1.0
Prediction:
SpII
Cleavage site amino acid:
38
Score:
6.61804
Cleavage Rule:
Pos+2=S
TMHMM v2.0
Number of TMs:
Transmembrane, TMs: 1
Phobius
Signal Peptide:
No
Number of TMs:
1
PRED-TAT
Localization:
TM segment predicted: 20-40
Score:
0.604
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A0A076M4I0
A0A076M4I0_STRLI
SLIV_21285
Secreted Lipoprotein (Sec) - Unknown function
E
Experimental
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (Sec) - Chitinase
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Potential
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: A0A076M4G7
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
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Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
34
Cleavage Score (Cmax):
0.829
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
33
Score:
20.3447
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
Transmembrane, TMs: 1
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Sec signal peptide predicted. Most likely cleavage site: 1- 33 [AQA-AT]
Score:
0.999
Predict Now
A0A076M4G7
A0A076M4G7_STRLI
SLIV_08075
Secreted protein (Sec) - Chitinase
X
Potential
SToPS
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©2017 Copyright KU Leuven and FORTH/ICE-HT. Last Update: January 2019