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Strains
S. lividans TK24
Peripherome
Exportome
Membranome
Secretome
Sec
TAT
Type VII
S. coelicolor
S. lividans
TK24 vs
S. coelicolor
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S. lividans
TK24 Sec
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S. lividans
TK24 Sec
N
Nucleoid (0)
r
Ribosomal (0)
A
Cytoplasmic (0)
F2
Peripheral inner membrane, facing periplasm (0)
E
Inner membrane lipoproteins (156)
P
Peptidoglycan Binding (21)
X
Extra-cellular (416)
B
Integral inner membrane (0)
F1
Peripheral inner membrane, facing cytoplasm (0)
show distribution
Sub-cellular topologies of Streptomyces lividans TK24 proteins
416
# Proteins
TK24
N
0
A
0
r
0
F1
0
B
0
F2
0
E
156
P
21
Secretory
0
X
416
Accession
(Uniprot)
Entry
Name
(Uniprot) (*)
Gene
Name
(Uniprot) (*)
Gene
ID
(Uniprot) (*)
Protein names
(SToPSdb) (*)
Symbol
Level of
evidence
Existing
Rules
Homologous
Protein
in E.coli K-12 (STEPdb) (*)
Sub-cellular
Location
(STEPdb)
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (Sec) - Arabinan endo-1,5-alpha-L-arabinosidase (EC 3.2.1.99)
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Potential
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EEM1
SMART database
SMART: abnA
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
27
Cleavage Score (Cmax):
0.831
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
26
Score:
23.1002
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Sec signal peptide predicted. Most likely cleavage site: 1- 26 [ASA-YP]
Score:
0.932
Predict Now
D6EEM1
D6EEM1_STRLI
abnA
SLIV_25565
Secreted protein (Sec) - Arabinan endo-1,5-alpha-L-arabinosidase
X
Potential
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (Sec) - Unknown function
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Potential
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EEL9
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
29
Cleavage Score (Cmax):
0.226
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
23
Score:
15.2118
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Sec signal peptide predicted. Most likely cleavage site: 1- 21 [LPA-QQ]
Score:
0.99
Predict Now
D6EEL9
D6EEL9_STRLI
SLIV_25555
Secreted protein (Sec) - Unknown function
X
Potential
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (Sec) - Peptidase
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Experimental
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EEK1
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
30
Cleavage Score (Cmax):
0.476
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
29
Score:
14.9786
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Sec signal peptide predicted. Most likely cleavage site: 1- 29 [SAA-QD]
Score:
0.972
Predict Now
D6EEK1
D6EEK1_STRLI
SLIV_25470
Secreted protein (Sec) - Peptidase
X
Experimental
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted Lipoprotein (Sec) - Unknown function (DUF4247 family)
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Experimental
Predicted sub-cellular location:
Secreted lipoprotein
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EEI9
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
28
Cleavage Score (Cmax):
0.239
LipoP 1.0
Prediction:
SpII
Cleavage site amino acid:
22
Score:
18.2992
Cleavage Rule:
Pos+2=S
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Sec signal peptide predicted. Most likely cleavage site: 1- 27 [SDG-ED]
Score:
0.988
Predict Now
D6EEI9
D6EEI9_STRLI
SLIV_25415
Secreted Lipoprotein (Sec) - Unknown function (DUF4247 family)
E
Experimental
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (TAT) - Metalloproteinase
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Potential
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EEH2
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
36
Cleavage Score (Cmax):
0.465
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
35
Score:
9.73578
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
Transmembrane, TMs: 1
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Sec signal peptide predicted. Most likely cleavage site: 1- 35 [AAA-AG]
Score:
0.992
Predict Now
D6EEH2
D6EEH2_STRLI
SLIV_25315
Secreted protein (Sec) - Metalloproteinase
X
Potential
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted Lipoprotein (Sec) - Sortase
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Potential
Predicted sub-cellular location:
Secreted lipoprotein
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EEG6
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
40
Cleavage Score (Cmax):
0.244
LipoP 1.0
Prediction:
SpII
Cleavage site amino acid:
17
Score:
11.9492
Cleavage Rule:
Pos+2=S
TMHMM v2.0
Number of TMs:
Transmembrane, TMs: 1
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Sec signal peptide predicted. Most likely cleavage site: 1- 39 [SAA-QS]
Score:
0.971
Predict Now
D6EEG6
D6EEG6_STRLI
SLIV_25285
Secreted Lipoprotein (Sec) - Sortase
E
Potential
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (Sec) - Unknown function
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Experimental
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EEG3
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
32
Cleavage Score (Cmax):
0.281
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
31
Score:
13.1484
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
Transmembrane, TMs: 1
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Sec signal peptide predicted. Most likely cleavage site: 1- 22 [VFA-TY]
Score:
0.968
Predict Now
D6EEG3
D6EEG3_STRLI
SLIV_25270
Secreted protein (Sec) - Unknown function
X
Experimental
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (Sec) - Dehydrogenase
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Experimental
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EEF6
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
30
Cleavage Score (Cmax):
0.254
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
29
Score:
5.00829
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Sec signal peptide predicted. Most likely cleavage site: 1- 29 [ALA-AE]
Score:
0.996
Predict Now
D6EEF6
D6EEF6_STRLI
SLIV_25235
Secreted protein (Sec) - Dehydrogenase
X
Experimental
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (Sec) - Unknown function
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Experimental
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EEE8
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
28
Cleavage Score (Cmax):
0.628
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
27
Score:
24.9113
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
Transmembrane, TMs: 1
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Sec signal peptide predicted. Most likely cleavage site: 1- 27 [ASA-AE]
Score:
0.999
Predict Now
D6EEE8
D6EEE8_STRLI
SLIV_25205
Secreted protein (Sec) - Unknown function
X
Experimental
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (Sec) - Chitinase II (IPR011583)
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Potential
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EEE1
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
29
Cleavage Score (Cmax):
0.755
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
28
Score:
23.5944
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
Transmembrane, TMs: 1
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Sec signal peptide predicted. Most likely cleavage site: 1- 28 [ASA-AP]
Score:
0.981
Predict Now
D6EEE1
D6EEE1_STRLI
SLIV_25170
Secreted protein (Sec) - Chitinase II (IPR011583)
X
Potential
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted Lipoprotein (Sec) - Unknown function
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Potential
Predicted sub-cellular location:
Secreted lipoprotein
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EED0
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
31
Cleavage Score (Cmax):
0.315
LipoP 1.0
Prediction:
SpII
Cleavage site amino acid:
22
Score:
23.9787
Cleavage Rule:
Pos+2=G
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Tat signal peptide predicted. Most likely cleavage site: 1- 30 [GKA-AD]
Score:
0.862
Predict Now
D6EED0
D6EED0_STRLI
SLIV_25110
Secreted Lipoprotein (Sec) - Unknown function
E
Potential
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (Sec) - Protein with Alpha/Beta hydrolase fold (IPR029058) and Peptidase S33 tripeptidyl aminopeptidase-like, C-terminal (IPR013595)
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Experimental
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EEC9
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
34
Cleavage Score (Cmax):
0.785
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
33
Score:
18.7785
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
Transmembrane, TMs: 1
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Sec signal peptide predicted. Most likely cleavage site: 1- 33 [ASA-AG]
Score:
0.999
Predict Now
D6EEC9
D6EEC9_STRLI
SLIV_25105
Secreted protein (Sec) - Protein with Alpha/Beta hydrolase fold (IPR029058) and Peptidase S33 tripeptidyl aminopeptidase-like, C-terminal (IPR013595)
X
Experimental
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (Sec) - Unknown function
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Potential
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EE12
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
27
Cleavage Score (Cmax):
0.249
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
24
Score:
6.64495
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
Transmembrane, TMs: 1
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Sec signal peptide predicted. Most likely cleavage site: 1- 27 [HQA-SD]
Score:
0.98
Predict Now
D6EE12
D6EE12_STRLI
SLIV_14615
Secreted protein (Sec) - Unknown function
X
Potential
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted Lipoprotein (Sec) - Glycoside hydrolase/deacetylase
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Potential
Predicted sub-cellular location:
Secreted lipoprotein
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EE00
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
34
Cleavage Score (Cmax):
0.221
LipoP 1.0
Prediction:
SpII
Cleavage site amino acid:
28
Score:
4.25097
Cleavage Rule:
Pos+2=D
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Sec signal peptide predicted. Most likely cleavage site: 1- 42 [AAA-AG]
Score:
0.964
Predict Now
D6EE00
D6EE00_STRLI
SLIV_14560
Secreted Lipoprotein (Sec) - Glycoside hydrolase/deacetylase
E
Potential
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (Sec) - Dehydrogenase
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Experimental
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EDZ6
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
23
Cleavage Score (Cmax):
0.163
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
22
Score:
0.204565
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Sec signal peptide predicted. Most likely cleavage site: 1- 22 [RLA-AD]
Score:
0.991
Predict Now
D6EDZ6
D6EDZ6_STRLI
SLIV_14540
Secreted protein (Sec) - Dehydrogenase
X
Experimental
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (Sec) - Enodpeptidase, NLPC/P60 domain (IPR000064)
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Experimental
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EDW5
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
42
Cleavage Score (Cmax):
0.417
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
41
Score:
11.1318
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Sec signal peptide predicted. Most likely cleavage site: 1- 41 [VHA-DP]
Score:
1
Predict Now
D6EDW5
D6EDW5_STRLI
SLIV_14395
Secreted protein (Sec) - Enodpeptidase, NLPC/P60 domain (IPR000064)
X
Experimental
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted Lipoprotein (Sec) - Unknown function
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Potential
Predicted sub-cellular location:
Secreted lipoprotein
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EDV7
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
36
Cleavage Score (Cmax):
0.317
LipoP 1.0
Prediction:
SpII
Cleavage site amino acid:
26
Score:
21.7568
Cleavage Rule:
Pos+2=S
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Sec signal peptide predicted. Most likely cleavage site: 1- 74 [AKA-AL]
Score:
0.834
Predict Now
D6EDV7
D6EDV7_STRLI
SLIV_04440
Secreted Lipoprotein (Sec) - Unknown function
E
Potential
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (Sec) - Unknown function containing Ankyrin repeat (IPR002110)
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Potential
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EDU6
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
No
Cleavage site amino acid:
38
Cleavage Score (Cmax):
0.128
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
27
Score:
0.0014615
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
No
Number of TMs:
0
PRED-TAT
Localization:
Sec signal peptide predicted. Most likely cleavage site: 1- 27 [VRA-AL]
Score:
0.946
Predict Now
D6EDU6
D6EDU6_STRLI
SLIV_04380
Secreted protein (Sec) - Unknown function containing Ankyrin repeat (IPR002110)
X
Potential
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted Lipoprotein (Sec) - Solute binding lipoprotein
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Experimental
Predicted sub-cellular location:
Secreted lipoprotein
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EDU0
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
39
Cleavage Score (Cmax):
0.473
LipoP 1.0
Prediction:
SpII
Cleavage site amino acid:
28
Score:
22.4482
Cleavage Rule:
Pos+2=S
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Sec signal peptide predicted. Most likely cleavage site: 1- 35 [SGG-KK]
Score:
0.958
Predict Now
D6EDU0
D6EDU0_STRLI
SLIV_04350
Secreted Lipoprotein (Sec) - Solute binding lipoprotein
E
Experimental
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted Lipoprotein (Sec) - Sugar-binding lipoprotein
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Experimental
Predicted sub-cellular location:
Secreted lipoprotein
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EDQ5
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
35
Cleavage Score (Cmax):
0.474
LipoP 1.0
Prediction:
SpII
Cleavage site amino acid:
28
Score:
18.314
Cleavage Rule:
Pos+2=G
TMHMM v2.0
Number of TMs:
Transmembrane, TMs: 1
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Sec signal peptide predicted. Most likely cleavage site: 1- 27 [ALA-AC]
Score:
0.99
Predict Now
D6EDQ5
D6EDQ5_STRLI
SLIV_04180
Secreted Lipoprotein (Sec) - Sugar-binding lipoprotein
E
Experimental
SToPS
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©2017 Copyright KU Leuven and FORTH/ICE-HT. Last Update: January 2019