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Strains
S. lividans TK24
Peripherome
Exportome
Membranome
Secretome
Sec
TAT
Type VII
S. coelicolor
S. lividans
TK24 vs
S. coelicolor
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S. lividans
TK24 Sec
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S. lividans
TK24 Sec
N
Nucleoid (0)
r
Ribosomal (0)
A
Cytoplasmic (0)
F2
Peripheral inner membrane, facing periplasm (0)
E
Inner membrane lipoproteins (156)
P
Peptidoglycan Binding (21)
X
Extra-cellular (416)
B
Integral inner membrane (0)
F1
Peripheral inner membrane, facing cytoplasm (0)
show distribution
Sub-cellular topologies of Streptomyces lividans TK24 proteins
416
# Proteins
TK24
N
0
A
0
r
0
F1
0
B
0
F2
0
E
156
P
21
Secretory
0
X
416
Accession
(Uniprot)
Entry
Name
(Uniprot) (*)
Gene
Name
(Uniprot) (*)
Gene
ID
(Uniprot) (*)
Protein names
(SToPSdb) (*)
Symbol
Level of
evidence
Existing
Rules
Homologous
Protein
in E.coli K-12 (STEPdb) (*)
Sub-cellular
Location
(STEPdb)
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (Sec) - Oxidoreductase
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Potential
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EG98
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
26
Cleavage Score (Cmax):
0.167
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
25
Score:
1.80503
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Sec signal peptide predicted. Most likely cleavage site: 1- 21 [ATA-VR]
Score:
0.971
Predict Now
D6EG98
D6EG98_STRLI
SLIV_36110
Secreted protein (Sec) - Oxidoreductase
X
Potential
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (Sec) - Alpha-L-rhamnosidase (IPR016007)
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Potential
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EG95
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
35
Cleavage Score (Cmax):
0.725
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
34
Score:
17.6991
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
Transmembrane, TMs: 1
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Sec signal peptide predicted. Most likely cleavage site: 1- 34 [ADA-AT]
Score:
0.999
Predict Now
D6EG95
D6EG95_STRLI
SLIV_36095
Secreted protein (Sec) - Alpha-L-rhamnosidase (IPR016007)
X
Potential
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (Sec) - Uncharacterized protein
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Experimental
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EG20
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
33
Cleavage Score (Cmax):
0.817
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
32
Score:
9.43287
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
Transmembrane, TMs: 1
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Sec signal peptide predicted. Most likely cleavage site: 1- 32 [AYA-AD]
Score:
1
Predict Now
D6EG20
D6EG20_STRLI
SLIV_26065
Secreted protein (Sec) - Uncharacterized protein
X
Experimental
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (Sec) - Unknown function DUF1524
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Potential
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EFZ5
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
34
Cleavage Score (Cmax):
0.577
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
32
Score:
11.037
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
Transmembrane, TMs: 1
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Sec signal peptide predicted. Most likely cleavage site: 1- 33 [ASA-AL]
Score:
0.969
Predict Now
D6EFZ5
D6EFZ5_STRLI
SLIV_25945
Secreted protein (Sec) - Unknown function DUF1524
X
Potential
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted Lipoprotein (Sec)
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Potential
Predicted sub-cellular location:
Secreted lipoprotein
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EFY8
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
31
Cleavage Score (Cmax):
0.338
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
30
Score:
10.5004
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Sec signal peptide predicted. Most likely cleavage site: 1- 30 [ASA-SD]
Score:
0.999
Predict Now
D6EFY8
D6EFY8_STRLI
SLIV_25905
Secreted Lipoprotein (Sec) - unknown function
E
Potential
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted Lipoprotein (Sec) - SGNH hydrolase-type esterase domain (IPR013830)
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Experimental
Predicted sub-cellular location:
Secreted lipoprotein
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EFV3
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
36
Cleavage Score (Cmax):
0.196
LipoP 1.0
Prediction:
SpII
Cleavage site amino acid:
34
Score:
7.59196
Cleavage Rule:
Pos+2=D
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Tat signal peptide predicted. Most likely cleavage site: 1- 58 [APA-WD]
Score:
0.793
Predict Now
D6EFV3
D6EFV3_STRLI
SLIV_25740
Secreted Lipoprotein (Sec) - SGNH hydrolase-type esterase domain (IPR013830)
E
Experimental
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted Lipoprotein (Sec) - Multiple sugar-binding periplasmic receptor ChvE
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Experimental
Predicted sub-cellular location:
Secreted lipoprotein
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EFU1
SMART database
SMART: chvE
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
26
Cleavage Score (Cmax):
0.256
LipoP 1.0
Prediction:
SpII
Cleavage site amino acid:
23
Score:
22.1946
Cleavage Rule:
Pos+2=G
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Sec signal peptide predicted. Most likely cleavage site: 1- 25 [ACG-QS]
Score:
0.939
Predict Now
D6EFU1
D6EFU1_STRLI
chvE
SLIV_25680
Secreted Lipoprotein (Sec) - Multiple sugar-binding periplasmic receptor ChvE
E
Experimental
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted Lipoprotein (Sec) - Unknown function
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Potential
Predicted sub-cellular location:
Secreted lipoprotein
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EFT2
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
32
Cleavage Score (Cmax):
0.266
LipoP 1.0
Prediction:
SpII
Cleavage site amino acid:
18
Score:
8.56747
Cleavage Rule:
Pos+2=G
TMHMM v2.0
Number of TMs:
Transmembrane, TMs: 1
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Sec signal peptide predicted. Most likely cleavage site: 1- 25 [AWT-YT]
Score:
0.989
Predict Now
D6EFT2
D6EFT2_STRLI
SLIV_25635
Secreted Lipoprotein (Sec) - Unknown function
E
Potential
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (Sec) - Virulence factor Mce protein (IPR005693)
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Potential
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EFT1
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
30
Cleavage Score (Cmax):
0.504
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
29
Score:
6.17852
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
Transmembrane, TMs: 1
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Sec signal peptide predicted. Most likely cleavage site: 1- 29 [RYA-DL]
Score:
0.998
Predict Now
D6EFT1
D6EFT1_STRLI
SLIV_25630
Secreted protein (Sec) - Virulence factor Mce protein (IPR005693)
X
Potential
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (Sec) - Virulence factor Mce protein (IPR005693)
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Potential
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EFT0
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
28
Cleavage Score (Cmax):
0.258
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
27
Score:
10.642
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
Transmembrane, TMs: 1
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Sec signal peptide predicted. Most likely cleavage site: 1- 27 [ALA-LT]
Score:
0.993
Predict Now
D6EFT0
D6EFT0_STRLI
SLIV_25625
Secreted protein (Sec) - Virulence factor Mce protein (IPR005693)
X
Potential
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (Sec) - Unknown function
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Potential
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EFS2
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
29
Cleavage Score (Cmax):
0.536
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
28
Score:
27.0061
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Sec signal peptide predicted. Most likely cleavage site: 1- 28 [SSA-VP]
Score:
0.895
Predict Now
D6EFS2
D6EFS2_STRLI
SLIV_25585
Secreted protein (Sec) - Unknown function
X
Potential
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (Sec) - Unknown function
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Potential
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EFS1
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
38
Cleavage Score (Cmax):
0.784
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
37
Score:
11.3772
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Sec signal peptide predicted. Most likely cleavage site: 1- 37 [ASA-SG]
Score:
1
Predict Now
D6EFS1
D6EFS1_STRLI
SLIV_25580
Secreted protein (Sec) - Unknown function
X
Potential
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (Sec) - Unknown function
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Experimental
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EFQ7
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
32
Cleavage Score (Cmax):
0.672
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
31
Score:
14.157
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
Transmembrane, TMs: 1
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Sec signal peptide predicted. Most likely cleavage site: 1- 31 [VHA-AE]
Score:
1
Predict Now
D6EFQ7
D6EFQ7_STRLI
SLIV_15645
Secreted protein (Sec) - Unknown function
X
Experimental
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted Lipoprotein (Sec) - Unknown function
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Experimental
Predicted sub-cellular location:
Secreted lipoprotein
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EFN5
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
31
Cleavage Score (Cmax):
0.216
LipoP 1.0
Prediction:
SpII
Cleavage site amino acid:
22
Score:
27.6913
Cleavage Rule:
Pos+2=G
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Sec signal peptide predicted. Most likely cleavage site: 1- 26 [GSG-DD]
Score:
0.932
Predict Now
D6EFN5
D6EFN5_STRLI
SLIV_15535
Secreted Lipoprotein (Sec) - Unknown function
E
Experimental
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (Sec) - Unknown function
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Experimental
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EFN4
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
28
Cleavage Score (Cmax):
0.525
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
27
Score:
20.3647
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Sec signal peptide predicted. Most likely cleavage site: 1- 27 [AQA-IG]
Score:
0.999
Predict Now
D6EFN4
D6EFN4_STRLI
SLIV_15530
Secreted protein (Sec) - Unknown function
X
Experimental
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted Lipoprotein (Sec) - Glycoside hydrolase superfamily protein (IPR017853)
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Potential
Predicted sub-cellular location:
Secreted lipoprotein
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EFM9
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
33
Cleavage Score (Cmax):
0.713
LipoP 1.0
Prediction:
SpII
Cleavage site amino acid:
21
Score:
26.2988
Cleavage Rule:
Pos+2=A
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Sec signal peptide predicted. Most likely cleavage site: 1- 58 [ASA-TD]
Score:
0.914
Predict Now
D6EFM9
D6EFM9_STRLI
SLIV_15505
Secreted Lipoprotein (Sec) - Glycoside hydrolase superfamily protein (IPR017853)
E
Potential
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (Sec) - Transglycosylase SLT
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Potential
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EFK1
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
42
Cleavage Score (Cmax):
0.637
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
41
Score:
14.4941
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
Transmembrane, TMs: 1
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Sec signal peptide predicted. Most likely cleavage site: 1- 41 [ASA-AT]
Score:
0.978
Predict Now
D6EFK1
D6EFK1_STRLI
SLIV_15360
Secreted protein (Sec) - Transglycosylase SLT
X
Potential
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted Lipoprotein (Sec) - Lipoprotein localisation LolA/LolB/LppX-like protein (IPR029046)
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Experimental
Predicted sub-cellular location:
Secreted lipoprotein
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EFE8
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
37
Cleavage Score (Cmax):
0.261
LipoP 1.0
Prediction:
SpII
Cleavage site amino acid:
24
Score:
19.8182
Cleavage Rule:
Pos+2=T
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Tat signal peptide predicted. Most likely cleavage site: 1- 58 [APA-LT]
Score:
0.479
Predict Now
D6EFE8
D6EFE8_STRLI
SLIV_15085
Secreted Lipoprotein (Sec) - Putative lipoprotein localisation LolA/LolB/LppX-like protein (IPR029046)
E
Experimental
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted Lipoprotein (Sec) - Lipoprotein localisation LolA/LolB/LppX-like protein (IPR029046)
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Experimental
Predicted sub-cellular location:
Secreted lipoprotein
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EFE7
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
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Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
32
Cleavage Score (Cmax):
0.487
LipoP 1.0
Prediction:
SpII
Cleavage site amino acid:
24
Score:
10.3677
Cleavage Rule:
Pos+2=A
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Sec signal peptide predicted. Most likely cleavage site: 1- 22 [AGA-VG]
Score:
0.949
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D6EFE7
D6EFE7_STRLI
SLIV_15080
Secreted Lipoprotein (Sec) - Putative lipoprotein localisation LolA/LolB/LppX-like protein (IPR029046)
E
Experimental
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (Sec) - YerB-like protein
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Potential
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EFA6
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
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Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
34
Cleavage Score (Cmax):
0.181
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
29
Score:
15.6301
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
Transmembrane, TMs: 1
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Sec signal peptide predicted. Most likely cleavage site: 1- 29 [CTA-GP]
Score:
0.879
Predict Now
D6EFA6
D6EFA6_STRLI
SLIV_04980
Secreted protein (Sec) - YerB-like protein
X
Potential
SToPS
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©2017 Copyright KU Leuven and FORTH/ICE-HT. Last Update: January 2019