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Strains
S. lividans TK24
Peripherome
Exportome
Membranome
Secretome
Sec
TAT
Type VII
S. coelicolor
S. lividans
TK24 vs
S. coelicolor
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S. lividans
TK24 Sec
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S. lividans
TK24 Sec
N
Nucleoid (0)
r
Ribosomal (0)
A
Cytoplasmic (0)
F2
Peripheral inner membrane, facing periplasm (0)
E
Inner membrane lipoproteins (156)
P
Peptidoglycan Binding (21)
X
Extra-cellular (416)
B
Integral inner membrane (0)
F1
Peripheral inner membrane, facing cytoplasm (0)
show distribution
Sub-cellular topologies of Streptomyces lividans TK24 proteins
416
# Proteins
TK24
N
0
A
0
r
0
F1
0
B
0
F2
0
E
156
P
21
Secretory
0
X
416
Accession
(Uniprot)
Entry
Name
(Uniprot) (*)
Gene
Name
(Uniprot) (*)
Gene
ID
(Uniprot) (*)
Protein names
(SToPSdb) (*)
Symbol
Level of
evidence
Existing
Rules
Homologous
Protein
in E.coli K-12 (STEPdb) (*)
Sub-cellular
Location
(STEPdb)
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (Sec) - Serine protease
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Experimental
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EP52
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
33
Cleavage Score (Cmax):
0.409
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
32
Score:
17.6414
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Sec signal peptide predicted. Most likely cleavage site: 1- 32 [AAA-DS]
Score:
0.993
Predict Now
D6EP52
D6EP52_STRLI
SLIV_09505
Secreted protein (Sec) - Serine protease
X
Experimental
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (Sec) - Peptidase
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Experimental
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EP33
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
45
Cleavage Score (Cmax):
0.567
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
44
Score:
14.8071
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
Transmembrane, TMs: 1
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Sec signal peptide predicted. Most likely cleavage site: 1- 44 [ALA-AE]
Score:
1
Predict Now
D6EP33
D6EP33_STRLI
SLIV_09410
Secreted protein (Sec) - Peptidase
X
Experimental
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (Sec) - RedV protein - Putative oxidoreductase (IPR000415)
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Potential
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6ENZ0
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
62
Cleavage Score (Cmax):
0.211
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
19
Score:
4.69133
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Tat signal peptide predicted. Most likely cleavage site: 1- 26 [AGA-AA]
Score:
0.831
Predict Now
D6ENZ0
D6ENZ0_STRLI
SLIV_09195
Secreted protein (Sec) - RedV protein
X
Potential
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted Lipoprotein (Sec) - NlpA family (IPR004872)
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Experimental
Predicted sub-cellular location:
Secreted lipoprotein
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6ENU9
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
31
Cleavage Score (Cmax):
0.205
LipoP 1.0
Prediction:
SpII
Cleavage site amino acid:
23
Score:
20.4125
Cleavage Rule:
Pos+2=G
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Sec signal peptide predicted. Most likely cleavage site: 1- 41 [VVA-AS]
Score:
0.969
Predict Now
D6ENU9
D6ENU9_STRLI
SLIV_29940
Secreted Lipoprotein (Sec) - NlpA family (IPR004872)
E
Experimental
SToPS
P28635
STEPdb
E
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (Sec) - Protein containing transpeptidase activity (IPR005490)
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Experimental
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6ENT4
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
23
Cleavage Score (Cmax):
0.385
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
24
Score:
13.6329
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Sec signal peptide predicted. Most likely cleavage site: 1- 22 [APA-DG]
Score:
0.991
Predict Now
D6ENT4
D6ENT4_STRLI
SLIV_29865
Secreted protein (Sec) - Protein containing transpeptidase activity (IPR005490)
X
Experimental
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (Sec) - Alpha-N-arabinofuranosidase 1 (EC 3.2.1.55)
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Potential
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6ENS3
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
29
Cleavage Score (Cmax):
0.597
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
28
Score:
23.8146
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Sec signal peptide predicted. Most likely cleavage site: 1- 28 [AHA-EA]
Score:
1
Predict Now
D6ENS3
D6ENS3_STRLI
SLIV_29810
Secreted protein (Sec) - Alpha-N-arabinofuranosidase 1 (EC 3.2.1.55)
X
Potential
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (Sec) - Unknown function
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Potential
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6ENM4
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
30
Cleavage Score (Cmax):
0.29
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
22
Score:
1.68034
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
Transmembrane, TMs: 1
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Sec signal peptide predicted. Most likely cleavage site: 1- 22 [VFA-VK]
Score:
0.932
Predict Now
D6ENM4
D6ENM4_STRLI
SLIV_29570
Secreted protein (Sec) - Unknown function
X
Potential
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (Sec) - Unknown function
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Experimental
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6ENK7
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
No
Cleavage site amino acid:
44
Cleavage Score (Cmax):
0.709
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
40
Score:
0.488359
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
No
Number of TMs:
0
PRED-TAT
Localization:
Sec signal peptide predicted. Most likely cleavage site: 1- 43 [ATA-AQ]
Score:
0.985
Predict Now
D6ENK7
D6ENK7_STRLI
SLIV_29495
Secreted protein (Sec) - Unknown function
X
Experimental
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted Lipoprotein (Sec) - Oligopeptide binding protein
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Experimental
Predicted sub-cellular location:
Secreted lipoprotein
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6ENK2
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
37
Cleavage Score (Cmax):
0.245
LipoP 1.0
Prediction:
SpII
Cleavage site amino acid:
21
Score:
20.2119
Cleavage Rule:
Pos+2=G
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Sec signal peptide predicted. Most likely cleavage site: 1- 20 [VLA-AC]
Score:
0.991
Predict Now
D6ENK2
D6ENK2_STRLI
SLIV_29470
Secreted Lipoprotein (Sec) - Oligopeptide binding protein
E
Experimental
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (Sec) - Unknown function
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Potential
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6ENG4
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
28
Cleavage Score (Cmax):
0.659
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
30
Score:
14.3043
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Sec signal peptide predicted. Most likely cleavage site: 1- 27 [ASA-SS]
Score:
0.968
Predict Now
D6ENG4
D6ENG4_STRLI
SLIV_19505
Secreted protein (Sec) - Unknown function
X
Potential
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted Lipoprotein (Sec) - Esterase, PHB depolymerase (IPR010126)
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Potential
Predicted sub-cellular location:
Secreted lipoprotein
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6ENF2
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
48
Cleavage Score (Cmax):
0.373
LipoP 1.0
Prediction:
SpII
Cleavage site amino acid:
32
Score:
8.243
Cleavage Rule:
Pos+2=A
TMHMM v2.0
Number of TMs:
Transmembrane, TMs: 1
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Sec signal peptide predicted. Most likely cleavage site: 1- 65 [ATA-AP]
Score:
0.992
Predict Now
D6ENF2
D6ENF2_STRLI
SLIV_19445
Secreted Lipoprotein (Sec) - Esterase, PHB depolymerase (IPR010126)
E
Potential
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (Sec) - Uncharacterized protein
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Potential
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6ENE0
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
37
Cleavage Score (Cmax):
0.342
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
31
Score:
13.0144
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
Transmembrane, TMs: 1
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Sec signal peptide predicted. Most likely cleavage site: 1- 43 [APA-QE]
Score:
0.98
Predict Now
D6ENE0
D6ENE0_STRLI
SLIV_19385
Secreted protein (Sec) - Uncharacterized protein
X
Potential
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted Lipoprotein (Sec) - Unknown function
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Potential
Predicted sub-cellular location:
Secreted lipoprotein
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6END9
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
22
Cleavage Score (Cmax):
0.261
LipoP 1.0
Prediction:
SpII
Cleavage site amino acid:
16
Score:
2.52473
Cleavage Rule:
Pos+2=L
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Sec signal peptide predicted. Most likely cleavage site: 1- 29 [VLA-AV]
Score:
0.978
Predict Now
D6END9
D6END9_STRLI
SLIV_19380
Secreted Lipoprotein (Sec) - Unknown function
E
Potential
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Integral membrane protein containig phosphopeptide recognition domain
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Experimental
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EN72
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
30
Cleavage Score (Cmax):
0.153
LipoP 1.0
Prediction:
TMH
Cleavage site amino acid:
0
Score:
0.268144
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
Transmembrane, TMs: 1
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
TM segment predicted: 5-25
Score:
0.946
Predict Now
D6EN72
D6EN72_STRLI
SLIV_19050
Secreted protein (Sec) - Uncharacterized protein
X
Experimental
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (Sec) - Penicillin binding protein A
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Experimental
Predicted sub-cellular location:
Extra-cellular, Peptidoglycan-associated
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EN69
SMART database
SMART: pbpA
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
32
Cleavage Score (Cmax):
0.521
LipoP 1.0
Prediction:
CYT
Cleavage site amino acid:
0
Score:
-0.200913
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Sec signal peptide predicted. Most likely cleavage site: 1- 31 [VQA-DE]
Score:
0.998
Predict Now
D6EN69
D6EN69_STRLI
pbpA
SLIV_19035
Secreted protein (Sec) - Penicillin binding protein A
X,P
Experimental
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (TAT) - Beta-xylanase (EC 3.2.1.8)
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Potential
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EN39
SMART database
SMART: xlnA
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
42
Cleavage Score (Cmax):
0.861
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
41
Score:
9.86577
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
Transmembrane, TMs: 1
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Sec signal peptide predicted. Most likely cleavage site: 1- 41 [AHA-AE]
Score:
0.999
Predict Now
D6EN39
D6EN39_STRLI
xlnA
SLIV_08955
Secreted protein (Sec) - Beta-xylanase
X
Potential
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (Sec) - Alpha-L-arabinofuranosidase (EC 3.2.1.55) (Arabinofuranosidase)
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Potential
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EN38
SMART database
SMART: abfB
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
38
Cleavage Score (Cmax):
0.658
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
37
Score:
15.9766
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
Transmembrane, TMs: 1
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Sec signal peptide predicted. Most likely cleavage site: 1- 37 [AQA-AG]
Score:
0.999
Predict Now
D6EN38
D6EN38_STRLI
abfB
SLIV_08950
Secreted protein (Sec) - Alpha-L-arabinofuranosidase (EC 3.2.1.55) (Arabinofuranosidase)
X
Potential
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (Sec) - Oxidoreductase (Uncharacterized protein)
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Potential
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EN23
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
24
Cleavage Score (Cmax):
0.203
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
23
Score:
7.6218
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Sec signal peptide predicted. Most likely cleavage site: 1- 23 [ALA-FW]
Score:
0.991
Predict Now
D6EN23
D6EN23_STRLI
SLIV_08875
Secreted protein (Sec) - Oxidoreductase (Uncharacterized protein)
X
Potential
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (Sec) - Chitinase II (IPR011583)
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Experimental
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EN17
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
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Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
22
Cleavage Score (Cmax):
0.679
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
26
Score:
25.6874
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
Transmembrane, TMs: 1
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Sec signal peptide predicted. Most likely cleavage site: 1- 26 [ARA-AG]
Score:
0.997
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D6EN17
D6EN17_STRLI
SLIV_08845
Secreted protein (Sec) - Chitinase II (IPR011583)
X
Experimental
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (Sec) - Unknown function
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Potential
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EMY2
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
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Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
27
Cleavage Score (Cmax):
0.489
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
26
Score:
21.7117
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Sec signal peptide predicted. Most likely cleavage site: 1- 23 [APA-AT]
Score:
0.988
Predict Now
D6EMY2
D6EMY2_STRLI
SLIV_08675
Secreted protein (Sec) - Unknown function
X
Potential
SToPS
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©2017 Copyright KU Leuven and FORTH/ICE-HT. Last Update: January 2019