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Strains
S. lividans TK24
Peripherome
Exportome
Membranome
Secretome
Sec
TAT
Type VII
S. coelicolor
S. lividans
TK24 vs
S. coelicolor
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S. lividans
TK24 complete proteome
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S. lividans
TK24 complete proteome
N
Nucleoid (2)
r
Ribosomal (1)
A
Cytoplasmic (378)
F2
Peripheral inner membrane, facing periplasm (0)
E
Inner membrane lipoproteins (0)
P
Peptidoglycan Binding (0)
X
Extra-cellular (0)
B
Integral inner membrane (0)
F1
Peripheral inner membrane, facing cytoplasm (378)
show distribution
Sub-cellular topologies of Streptomyces lividans TK24 proteins
378
# Proteins
TK24
N
2
A
378
r
1
F1
378
B
0
F2
0
E
0
P
0
Secretory
0
X
0
Accession
(Uniprot)
Entry
Name
(Uniprot) (*)
Gene
Name
(Uniprot) (*)
Gene
ID
(Uniprot) (*)
Protein names
(SToPSdb) (*)
Symbol
Level of
evidence
Existing
Rules
Homologous
Protein
in E.coli K-12 (STEPdb) (*)
Sub-cellular
Location
(STEPdb)
Manual Curation in SToPs
Comments
UniProt Name:
Argininosuccinate synthase (EC 6.3.4.5) (Citrulline--aspartate ligase)
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Experimental
Predicted sub-cellular location:
Cytoplasmic, Peripheral plasma membrane protein fa
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EDN0
SMART database
SMART: argG
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
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Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
No
Cleavage site amino acid:
30
Cleavage Score (Cmax):
0.252
LipoP 1.0
Prediction:
CYT
Cleavage site amino acid:
0
Score:
-0.200913
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
No
Number of TMs:
0
PRED-TAT
Localization:
No signal peptide predicted
Score:
0.1
Predict Now
D6EDN0
D6EDN0_STRLI
argG
SLIV_04065
Argininosuccinate synthase (EC 6.3.4.5) (Citrulline--aspartate ligase)
A,F1
Experimental
SToPS
P0A6E4
STEPdb
F1
Manual Curation in SToPs
Comments
UniProt Name:
Acyl carrier protein (ACP)
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Potential
Predicted sub-cellular location:
Cytoplasmic, Peripheral plasma membrane protein fa
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EDH3
SMART database
SMART: acpP
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
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Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
No
Cleavage site amino acid:
68
Cleavage Score (Cmax):
0.119
LipoP 1.0
Prediction:
CYT
Cleavage site amino acid:
0
Score:
-0.200913
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
No
Number of TMs:
0
PRED-TAT
Localization:
No signal peptide predicted
Score:
0.999
Predict Now
D6EDH3
D6EDH3_STRLI
acpP
SLIV_35195
Acyl carrier protein (ACP)
A,F1
Potential
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
ABC transporter ATP-binding protein
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Potential
Predicted sub-cellular location:
Cytoplasmic, Peripheral plasma membrane protein fa
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6ED85
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
No
Cleavage site amino acid:
45
Cleavage Score (Cmax):
0.168
LipoP 1.0
Prediction:
CYT
Cleavage site amino acid:
0
Score:
-0.200913
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
No
Number of TMs:
0
PRED-TAT
Localization:
No signal peptide predicted
Score:
0.734
Predict Now
D6ED85
D6ED85_STRLI
SLIV_34760
ABC transporter ATP-binding protein
A,F1
Potential
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.193)
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Experimental
Predicted sub-cellular location:
Cytoplasmic, Peripheral plasma membrane protein fa
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6ED51
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
No
Cleavage site amino acid:
60
Cleavage Score (Cmax):
0.303
LipoP 1.0
Prediction:
CYT
Cleavage site amino acid:
0
Score:
-0.200913
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
No
Number of TMs:
0
PRED-TAT
Localization:
No signal peptide predicted
Score:
0.994
Predict Now
D6ED51
D6ED51_STRLI
SLIV_24925
Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.193)
A,F1
Experimental
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Chaperone protein DnaJ 2
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Experimental
Predicted sub-cellular location:
Cytoplasmic, Peripheral plasma membrane protein fa
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6ED49
SMART database
SMART: dnaJ
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
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Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
No
Cleavage site amino acid:
18
Cleavage Score (Cmax):
0.118
LipoP 1.0
Prediction:
CYT
Cleavage site amino acid:
0
Score:
-0.200913
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
No
Number of TMs:
0
PRED-TAT
Localization:
No signal peptide predicted
Score:
0.843
Predict Now
D6ED49
D6ED49_STRLI
dnaJ
SLIV_24915
Chaperone protein DnaJ 2
A,F1
Experimental
SToPS
P08622
STEPdb
F1
Manual Curation in SToPs
Comments
UniProt Name:
Elongation factor 4
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Experimental
Predicted sub-cellular location:
Cytoplasmic, Peripheral plasma membrane protein fa
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6ED41
SMART database
SMART: lepA
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
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Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
No
Cleavage site amino acid:
36
Cleavage Score (Cmax):
0.12
LipoP 1.0
Prediction:
CYT
Cleavage site amino acid:
0
Score:
-0.200913
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
No
Number of TMs:
0
PRED-TAT
Localization:
No signal peptide predicted
Score:
0.999
Predict Now
D6ED41
D6ED41_STRLI
lepA
SLIV_24875
Elongation factor 4
A,F1
Experimental
SToPS
P60785
STEPdb
F1
Manual Curation in SToPs
Comments
UniProt Name:
Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41) (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma-semialdehyde dehydrogenase)
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Experimental
Predicted sub-cellular location:
Cytoplasmic, Peripheral plasma membrane protein fa
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6ED17
SMART database
SMART: proA
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
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Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
No
Cleavage site amino acid:
59
Cleavage Score (Cmax):
0.172
LipoP 1.0
Prediction:
CYT
Cleavage site amino acid:
0
Score:
-0.200913
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
No
Number of TMs:
0
PRED-TAT
Localization:
No signal peptide predicted
Score:
0.751
Predict Now
D6ED17
D6ED17_STRLI
proA
SLIV_24750
Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41) (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma-semialdehyde dehydrogenase)
A,F1
Experimental
SToPS
P07004
STEPdb
F1
Manual Curation in SToPs
Comments
UniProt Name:
Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Nucleoside-2-P kinase)
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Experimental
Predicted sub-cellular location:
Cytoplasmic, Peripheral plasma membrane protein fa
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6ECY6
SMART database
SMART: ndk
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
No
Cleavage site amino acid:
33
Cleavage Score (Cmax):
0.108
LipoP 1.0
Prediction:
CYT
Cleavage site amino acid:
0
Score:
-0.200913
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
No
Number of TMs:
0
PRED-TAT
Localization:
No signal peptide predicted
Score:
0.996
Predict Now
D6ECY6
D6ECY6_STRLI
ndk
SLIV_24615
Nucleoside diphosphate kinase (NDK) (NDP kinase) (EC 2.7.4.6) (Nucleoside-2-P kinase)
A,F1
Experimental
SToPS
P0A763
STEPdb
F1
Manual Curation in SToPs
Comments
UniProt Name:
Trigger factor (TF) (EC 5.2.1.8) (PPIase)
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Experimental
Predicted sub-cellular location:
Cytoplasmic, Peripheral plasma membrane protein fa
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6ECX8
SMART database
SMART: tig
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
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Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
No
Cleavage site amino acid:
31
Cleavage Score (Cmax):
0.123
LipoP 1.0
Prediction:
CYT
Cleavage site amino acid:
0
Score:
-0.200913
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
No
Number of TMs:
0
PRED-TAT
Localization:
No signal peptide predicted
Score:
1
Predict Now
D6ECX8
D6ECX8_STRLI
tig
SLIV_24575
Trigger factor (TF) (EC 5.2.1.8) (PPIase)
A,F1
Experimental
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Succinyl-CoA ligase [ADP-forming] subunit beta (EC 6.2.1.5) (Succinyl-CoA synthetase subunit beta)
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Experimental
Predicted sub-cellular location:
Cytoplasmic, Peripheral plasma membrane protein fa
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6ECR5
SMART database
SMART: sucC
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
No
Cleavage site amino acid:
31
Cleavage Score (Cmax):
0.125
LipoP 1.0
Prediction:
CYT
Cleavage site amino acid:
0
Score:
-0.200913
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
No
Number of TMs:
0
PRED-TAT
Localization:
No signal peptide predicted
Score:
1
Predict Now
D6ECR5
D6ECR5_STRLI
sucC
SLIV_14325
Succinyl-CoA ligase [ADP-forming] subunit beta (EC 6.2.1.5) (Succinyl-CoA synthetase subunit beta)
A,F1
Experimental
SToPS
P0A836
STEPdb
F1
Manual Curation in SToPs
Comments
UniProt Name:
Succinyl-CoA ligase [ADP-forming] subunit alpha (EC 6.2.1.5)
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Experimental
Predicted sub-cellular location:
Cytoplasmic, Peripheral plasma membrane protein fa
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6ECR4
SMART database
SMART: sucD1
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
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Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
No
Cleavage site amino acid:
45
Cleavage Score (Cmax):
0.14
LipoP 1.0
Prediction:
CYT
Cleavage site amino acid:
0
Score:
-0.200913
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
No
Number of TMs:
0
PRED-TAT
Localization:
No signal peptide predicted
Score:
0.877
Predict Now
D6ECR4
D6ECR4_STRLI
sucD1
SLIV_14320
Succinyl-CoA ligase [ADP-forming] subunit alpha (EC 6.2.1.5)
A,F1
Experimental
SToPS
P0AGE9
STEPdb
F1
Manual Curation in SToPs
Comments
UniProt Name:
Malate dehydrogenase (EC 1.1.1.37)
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Experimental
Predicted sub-cellular location:
Cytoplasmic, Peripheral plasma membrane protein fa
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6ECP6
SMART database
SMART: mdh
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
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Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
No
Cleavage site amino acid:
51
Cleavage Score (Cmax):
0.154
LipoP 1.0
Prediction:
CYT
Cleavage site amino acid:
0
Score:
-0.200913
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
No
Number of TMs:
0
PRED-TAT
Localization:
No signal peptide predicted
Score:
0.388
Predict Now
D6ECP6
D6ECP6_STRLI
mdh
SLIV_14235
Malate dehydrogenase (EC 1.1.1.37)
A,F1
Experimental
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Glycine betaine ABC transport system ATP-binding protein
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Experimental
Predicted sub-cellular location:
Cytoplasmic, Peripheral plasma membrane protein fa
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6ECP3
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
No
Cleavage site amino acid:
61
Cleavage Score (Cmax):
0.14
LipoP 1.0
Prediction:
CYT
Cleavage site amino acid:
0
Score:
-0.200913
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
No
Number of TMs:
0
PRED-TAT
Localization:
No signal peptide predicted
Score:
0.662
Predict Now
D6ECP3
D6ECP3_STRLI
SLIV_14220
Glycine betaine ABC transport system ATP-binding protein
A,F1
Experimental
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Serine hydroxymethyltransferase (SHMT) (Serine methylase) (EC 2.1.2.1)
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Experimental
Predicted sub-cellular location:
Cytoplasmic, Peripheral plasma membrane protein fa
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6ECN5
SMART database
SMART: glyA
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
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Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
No
Cleavage site amino acid:
30
Cleavage Score (Cmax):
0.162
LipoP 1.0
Prediction:
CYT
Cleavage site amino acid:
0
Score:
-0.200913
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
No
Number of TMs:
0
PRED-TAT
Localization:
No signal peptide predicted
Score:
0.997
Predict Now
D6ECN5
D6ECN5_STRLI
glyA
SLIV_14185
Serine hydroxymethyltransferase (SHMT) (Serine methylase) (EC 2.1.2.1)
A,F1
Experimental
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Succinate dehydrogenase iron-sulfur subunit (EC 1.3.5.1)
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Experimental
Predicted sub-cellular location:
Cytoplasmic, Peripheral plasma membrane protein fa
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6ECL7
SMART database
SMART: sdhB
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
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Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
No
Cleavage site amino acid:
19
Cleavage Score (Cmax):
0.252
LipoP 1.0
Prediction:
CYT
Cleavage site amino acid:
0
Score:
-0.200913
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
No
Number of TMs:
0
PRED-TAT
Localization:
No signal peptide predicted
Score:
0.999
Predict Now
D6ECL7
D6ECL7_STRLI
sdhB
SLIV_14100
Succinate dehydrogenase iron-sulfur subunit (EC 1.3.5.1)
A,F1
Experimental
SToPS
P07014
STEPdb
F1
Manual Curation in SToPs
Comments
UniProt Name:
Succinate dehydrogenase flavoprotein subunit (EC 1.3.5.1)
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Experimental
Predicted sub-cellular location:
Cytoplasmic, Peripheral plasma membrane protein fa
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6ECL6
SMART database
SMART: sdhA1
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
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Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
No
Cleavage site amino acid:
22
Cleavage Score (Cmax):
0.121
LipoP 1.0
Prediction:
CYT
Cleavage site amino acid:
0
Score:
-0.200913
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
No
Number of TMs:
0
PRED-TAT
Localization:
Sec signal peptide predicted. Most likely cleavage site: 1- 21 [RAA-IE]
Score:
0.879
Predict Now
D6ECL6
D6ECL6_STRLI
sdhA1
SLIV_14095
Succinate dehydrogenase flavoprotein subunit (EC 1.3.5.1)
A,F1
Experimental
SToPS
P0AC41
STEPdb
F1
Manual Curation in SToPs
Comments
UniProt Name:
Putative ABC transporter ATP-binding protein
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Experimental
Predicted sub-cellular location:
Cytoplasmic, Peripheral plasma membrane protein fa
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6ECI7
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
No
Cleavage site amino acid:
34
Cleavage Score (Cmax):
0.204
LipoP 1.0
Prediction:
CYT
Cleavage site amino acid:
0
Score:
-0.200913
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
No
Number of TMs:
0
PRED-TAT
Localization:
No signal peptide predicted
Score:
0.998
Predict Now
D6ECI7
D6ECI7_STRLI
SLIV_13945
Putative ABC transporter ATP-binding protein
A,F1
Experimental
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Thymidine phosphorylase (EC 2.4.2.4)
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Experimental
Predicted sub-cellular location:
Cytoplasmic, Peripheral plasma membrane protein fa
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6ECI3
SMART database
SMART: deoA
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
No
Cleavage site amino acid:
58
Cleavage Score (Cmax):
0.108
LipoP 1.0
Prediction:
CYT
Cleavage site amino acid:
0
Score:
-0.200913
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
No
Number of TMs:
0
PRED-TAT
Localization:
No signal peptide predicted
Score:
0.992
Predict Now
D6ECI3
D6ECI3_STRLI
deoA
SLIV_13925
Thymidine phosphorylase (EC 2.4.2.4)
A,F1
Experimental
SToPS
P07650
STEPdb
F1
Manual Curation in SToPs
Comments
UniProt Name:
Adenosine deaminase (EC 3.5.4.4) (Adenosine aminohydrolase)
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Experimental
Predicted sub-cellular location:
Cytoplasmic, Peripheral plasma membrane protein fa
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6ECH3
SMART database
SMART: add
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
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Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
No
Cleavage site amino acid:
29
Cleavage Score (Cmax):
0.127
LipoP 1.0
Prediction:
CYT
Cleavage site amino acid:
0
Score:
-0.200913
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
No
Number of TMs:
0
PRED-TAT
Localization:
No signal peptide predicted
Score:
0.909
Predict Now
D6ECH3
D6ECH3_STRLI
add
SLIV_13870
Adenosine deaminase (EC 3.5.4.4) (Adenosine aminohydrolase)
A,F1
Experimental
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Deoxyribose-phosphate aldolase
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Experimental
Predicted sub-cellular location:
Cytoplasmic, Peripheral plasma membrane protein fa
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6ECG0
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
No
Cleavage site amino acid:
10
Cleavage Score (Cmax):
0.239
LipoP 1.0
Prediction:
CYT
Cleavage site amino acid:
0
Score:
-0.200913
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
No
Number of TMs:
0
PRED-TAT
Localization:
Sec signal peptide predicted. Most likely cleavage site: 1- 26 [GFA-DV]
Score:
0.934
Predict Now
D6ECG0
D6ECG0_STRLI
SLIV_13805
Deoxyribose-phosphate aldolase
A,F1
Experimental
SToPS
P0A6L0
STEPdb
F1
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©2017 Copyright KU Leuven and FORTH/ICE-HT. Last Update: January 2019