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Strains
S. lividans TK24
Peripherome
Exportome
Membranome
Secretome
Sec
TAT
Type VII
S. coelicolor
S. lividans
TK24 vs
S. coelicolor
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S. lividans
TK24 complete proteome
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S. lividans
TK24 complete proteome
N
Nucleoid (2)
r
Ribosomal (1)
A
Cytoplasmic (378)
F2
Peripheral inner membrane, facing periplasm (0)
E
Inner membrane lipoproteins (0)
P
Peptidoglycan Binding (0)
X
Extra-cellular (0)
B
Integral inner membrane (0)
F1
Peripheral inner membrane, facing cytoplasm (378)
show distribution
Sub-cellular topologies of Streptomyces lividans TK24 proteins
378
# Proteins
TK24
N
2
A
378
r
1
F1
378
B
0
F2
0
E
0
P
0
Secretory
0
X
0
Accession
(Uniprot)
Entry
Name
(Uniprot) (*)
Gene
Name
(Uniprot) (*)
Gene
ID
(Uniprot) (*)
Protein names
(SToPSdb) (*)
Symbol
Level of
evidence
Existing
Rules
Homologous
Protein
in E.coli K-12 (STEPdb) (*)
Sub-cellular
Location
(STEPdb)
Manual Curation in SToPs
Comments
UniProt Name:
Acetyltransferase
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Experimental
Predicted sub-cellular location:
Cytoplasmic, Peripheral plasma membrane protein fa
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EHT4
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
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Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
No
Cleavage site amino acid:
28
Cleavage Score (Cmax):
0.116
LipoP 1.0
Prediction:
CYT
Cleavage site amino acid:
0
Score:
-0.200913
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
No
Number of TMs:
0
PRED-TAT
Localization:
No signal peptide predicted
Score:
0.761
Predict Now
D6EHT4
D6EHT4_STRLI
SLIV_36790
Acetyltransferase
A,F1
Experimental
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Pyruvate dehydrogenase E1 component (EC 1.2.4.1)
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Experimental
Predicted sub-cellular location:
Cytoplasmic, Peripheral plasma membrane protein fa
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EHL8
SMART database
SMART: aceE3
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
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Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
No
Cleavage site amino acid:
44
Cleavage Score (Cmax):
0.113
LipoP 1.0
Prediction:
CYT
Cleavage site amino acid:
0
Score:
-0.200913
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
No
Number of TMs:
0
PRED-TAT
Localization:
No signal peptide predicted
Score:
0.992
Predict Now
D6EHL8
D6EHL8_STRLI
aceE3
SLIV_26795
Pyruvate dehydrogenase E1 component (EC 1.2.4.1)
A,F1
Experimental
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Putative daunorubicin/doxorubicin resistance ATP-binding protein
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
By similarity
Predicted sub-cellular location:
Cytoplasmic, Peripheral plasma membrane protein fa
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EHE1
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
No
Cleavage site amino acid:
30
Cleavage Score (Cmax):
0.137
LipoP 1.0
Prediction:
CYT
Cleavage site amino acid:
0
Score:
-0.200913
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
No
Number of TMs:
0
PRED-TAT
Localization:
No signal peptide predicted
Score:
0.979
Predict Now
D6EHE1
D6EHE1_STRLI
SLIV_26435
Putative daunorubicin/doxorubicin resistance ATP-binding protein
A,F1
By similarity
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Methionine aminopeptidase (MAP) (MetAP) (EC 3.4.11.18) (Peptidase M)
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Experimental
Predicted sub-cellular location:
Cytoplasmic, Peripheral plasma membrane protein fa
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EHD2
SMART database
SMART: map
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
No
Cleavage site amino acid:
50
Cleavage Score (Cmax):
0.16
LipoP 1.0
Prediction:
CYT
Cleavage site amino acid:
0
Score:
-0.200913
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
No
Number of TMs:
0
PRED-TAT
Localization:
No signal peptide predicted
Score:
0.941
Predict Now
D6EHD2
D6EHD2_STRLI
map
SLIV_26390
Methionine aminopeptidase (MAP) (MetAP) (EC 3.4.11.18) (Peptidase M)
A,F1
Experimental
SToPS
P0AE18
STEPdb
F1
Manual Curation in SToPs
Comments
UniProt Name:
Hemin import ATP-binding protein HmuV (EC 3.6.3.-)
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Potential
Predicted sub-cellular location:
Cytoplasmic, Peripheral plasma membrane protein fa
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EHC5
SMART database
SMART: hmuV
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
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Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
No
Cleavage site amino acid:
21
Cleavage Score (Cmax):
0.172
LipoP 1.0
Prediction:
CYT
Cleavage site amino acid:
0
Score:
-0.200913
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
No
Number of TMs:
0
PRED-TAT
Localization:
No signal peptide predicted
Score:
0.186
Predict Now
D6EHC5
D6EHC5_STRLI
hmuV
SLIV_26350
Hemin import ATP-binding protein HmuV (EC 3.6.3.-)
A,F1
Potential
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Glutamate-1-semialdehyde 2,1-aminomutase (GSA) (EC 5.4.3.8) (Glutamate-1-semialdehyde aminotransferase)
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Experimental
Predicted sub-cellular location:
Cytoplasmic, Peripheral plasma membrane protein fa
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EH11
SMART database
SMART: hemL
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
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Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
No
Cleavage site amino acid:
37
Cleavage Score (Cmax):
0.315
LipoP 1.0
Prediction:
CYT
Cleavage site amino acid:
0
Score:
-0.200913
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
No
Number of TMs:
0
PRED-TAT
Localization:
No signal peptide predicted
Score:
0.75
Predict Now
D6EH11
D6EH11_STRLI
hemL
SLIV_15930
Glutamate-1-semialdehyde 2,1-aminomutase (GSA) (EC 5.4.3.8) (Glutamate-1-semialdehyde aminotransferase)
A,F1
Experimental
SToPS
P23893
STEPdb
F1
Manual Curation in SToPs
Comments
UniProt Name:
Nitrate reductase beta chain (EC 1.7.99.4)
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Potential
Predicted sub-cellular location:
Cytoplasmic, Peripheral plasma membrane protein fa
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EGV7
SMART database
SMART: narH1
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
No
Cleavage site amino acid:
30
Cleavage Score (Cmax):
0.13
LipoP 1.0
Prediction:
CYT
Cleavage site amino acid:
0
Score:
-0.200913
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
No
Number of TMs:
0
PRED-TAT
Localization:
No signal peptide predicted
Score:
0.981
Predict Now
D6EGV7
D6EGV7_STRLI
narH1
SLIV_05755
Nitrate reductase beta chain (EC 1.7.99.4)
A,F1
Potential
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Long-chain-fatty-acid-CoA ligase FadD15 (EC 6.2.1.3)
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Potential
Predicted sub-cellular location:
Cytoplasmic, Peripheral plasma membrane protein fa
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EGU0
SMART database
SMART: fadD15a
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
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Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
No
Cleavage site amino acid:
27
Cleavage Score (Cmax):
0.137
LipoP 1.0
Prediction:
CYT
Cleavage site amino acid:
0
Score:
-0.200913
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
No
Number of TMs:
0
PRED-TAT
Localization:
Sec signal peptide predicted. Most likely cleavage site: 1- 19 [GLA-DV]
Score:
0.925
Predict Now
D6EGU0
D6EGU0_STRLI
fadD15a
SLIV_05670
Long-chain-fatty-acid-CoA ligase FadD15 (EC 6.2.1.3)
A,F1
Potential
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Respiratory chain oxidoreductase
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Potential
Predicted sub-cellular location:
Cytoplasmic, Peripheral plasma membrane protein fa
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EGT3
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
No
Cleavage site amino acid:
39
Cleavage Score (Cmax):
0.111
LipoP 1.0
Prediction:
CYT
Cleavage site amino acid:
0
Score:
-0.200913
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
No
Number of TMs:
0
PRED-TAT
Localization:
No signal peptide predicted
Score:
1
Predict Now
D6EGT3
D6EGT3_STRLI
SLIV_05635
Respiratory chain oxidoreductase
A,F1
Potential
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Formyl-CoA:oxalate CoA-transferase (FCOCT) (EC 2.8.3.16) (Formyl-coenzyme A transferase)
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Potential
Predicted sub-cellular location:
Cytoplasmic, Peripheral plasma membrane protein fa
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EGQ7
SMART database
SMART: frc
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
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Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
No
Cleavage site amino acid:
24
Cleavage Score (Cmax):
0.13
LipoP 1.0
Prediction:
CYT
Cleavage site amino acid:
0
Score:
-0.200913
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
No
Number of TMs:
0
PRED-TAT
Localization:
No signal peptide predicted
Score:
0.996
Predict Now
D6EGQ7
D6EGQ7_STRLI
frc
SLIV_05510
Formyl-CoA:oxalate CoA-transferase (FCOCT) (EC 2.8.3.16) (Formyl-coenzyme A transferase)
A,F1
Potential
SToPS
P69902
STEPdb
F1
Manual Curation in SToPs
Comments
UniProt Name:
Succinyl-CoA ligase [ADP-forming] subunit beta (EC 6.2.1.5) (Succinyl-CoA synthetase subunit beta)
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Potential
Predicted sub-cellular location:
Cytoplasmic, Peripheral plasma membrane protein fa
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EGQ5
SMART database
SMART: sucC
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
No
Cleavage site amino acid:
69
Cleavage Score (Cmax):
0.16
LipoP 1.0
Prediction:
CYT
Cleavage site amino acid:
0
Score:
-0.200913
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
No
Number of TMs:
0
PRED-TAT
Localization:
No signal peptide predicted
Score:
1
Predict Now
D6EGQ5
D6EGQ5_STRLI
sucC
SLIV_05500
Succinyl-CoA ligase [ADP-forming] subunit beta (EC 6.2.1.5) (Succinyl-CoA synthetase subunit beta)
A,F1
Potential
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Succinyl-CoA ligase [ADP-forming] subunit alpha (EC 6.2.1.5)
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Potential
Predicted sub-cellular location:
Cytoplasmic, Peripheral plasma membrane protein fa
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EGQ4
SMART database
SMART: sucD2
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
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Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
No
Cleavage site amino acid:
20
Cleavage Score (Cmax):
0.138
LipoP 1.0
Prediction:
CYT
Cleavage site amino acid:
0
Score:
-0.200913
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
No
Number of TMs:
0
PRED-TAT
Localization:
No signal peptide predicted
Score:
0.96
Predict Now
D6EGQ4
D6EGQ4_STRLI
sucD2
SLIV_05495
Succinyl-CoA ligase [ADP-forming] subunit alpha (EC 6.2.1.5)
A,F1
Potential
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Elongation factor G (EF-G)
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Potential
Predicted sub-cellular location:
Cytoplasmic, Peripheral plasma membrane protein fa
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EGQ1
SMART database
SMART: fusA
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
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Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
No
Cleavage site amino acid:
22
Cleavage Score (Cmax):
0.114
LipoP 1.0
Prediction:
CYT
Cleavage site amino acid:
0
Score:
-0.200913
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
No
Number of TMs:
0
PRED-TAT
Localization:
Sec signal peptide predicted. Most likely cleavage site: 1- 20 [VDA-GK]
Score:
0.728
Predict Now
D6EGQ1
D6EGQ1_STRLI
fusA
SLIV_05475
Elongation factor G (EF-G)
A,F1
Potential
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
6-phosphogluconate dehydrogenase
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Experimental
Predicted sub-cellular location:
Cytoplasmic, Peripheral plasma membrane protein fa
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EGJ9
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
No
Cleavage site amino acid:
39
Cleavage Score (Cmax):
0.134
LipoP 1.0
Prediction:
CYT
Cleavage site amino acid:
0
Score:
-0.200913
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
No
Number of TMs:
0
PRED-TAT
Localization:
No signal peptide predicted
Score:
0.986
Predict Now
D6EGJ9
D6EGJ9_STRLI
SLIV_05220
6-phosphogluconate dehydrogenase
A,F1
Experimental
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Transketolase (EC 2.2.1.1)
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Experimental
Predicted sub-cellular location:
Cytoplasmic, Peripheral plasma membrane protein fa
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EGJ4
SMART database
SMART: tkt1
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
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Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
No
Cleavage site amino acid:
53
Cleavage Score (Cmax):
0.167
LipoP 1.0
Prediction:
CYT
Cleavage site amino acid:
0
Score:
-0.200913
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
No
Number of TMs:
0
PRED-TAT
Localization:
No signal peptide predicted
Score:
0.355
Predict Now
D6EGJ4
D6EGJ4_STRLI
tkt1
SLIV_05195
Transketolase (EC 2.2.1.1)
A,F1
Experimental
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Tylosin resistance ATP-binding protein TlrC
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Potential
Predicted sub-cellular location:
Cytoplasmic, Peripheral plasma membrane protein fa
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EGE0
SMART database
SMART: tlrC
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
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Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
No
Cleavage site amino acid:
34
Cleavage Score (Cmax):
0.113
LipoP 1.0
Prediction:
CYT
Cleavage site amino acid:
0
Score:
-0.200913
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
No
Number of TMs:
0
PRED-TAT
Localization:
No signal peptide predicted
Score:
0.931
Predict Now
D6EGE0
D6EGE0_STRLI
tlrC
SLIV_36315
Tylosin resistance ATP-binding protein TlrC
A,F1
Potential
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Dihydroxy-acid dehydratase
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Potential
Predicted sub-cellular location:
Cytoplasmic, Peripheral plasma membrane protein fa
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EGC5
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
No
Cleavage site amino acid:
54
Cleavage Score (Cmax):
0.126
LipoP 1.0
Prediction:
CYT
Cleavage site amino acid:
0
Score:
-0.200913
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
No
Number of TMs:
0
PRED-TAT
Localization:
No signal peptide predicted
Score:
0.968
Predict Now
D6EGC5
D6EGC5_STRLI
SLIV_36240
Dihydroxy-acid dehydratase
A,F1
Potential
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Asparagine synthase, glutamine-hydrolyzing
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Potential
Predicted sub-cellular location:
Cytoplasmic, Peripheral plasma membrane protein fa
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EG77
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
No
Cleavage site amino acid:
35
Cleavage Score (Cmax):
0.125
LipoP 1.0
Prediction:
CYT
Cleavage site amino acid:
0
Score:
-0.200913
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
No
Number of TMs:
0
PRED-TAT
Localization:
No signal peptide predicted
Score:
0.994
Predict Now
D6EG77
D6EG77_STRLI
SLIV_36010
Asparagine synthase, glutamine-hydrolyzing
A,F1
Potential
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Glutamate-1-semialdehyde 2,1-aminomutase
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Potential
Predicted sub-cellular location:
Cytoplasmic, Peripheral plasma membrane protein fa
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EG62
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
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Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
No
Cleavage site amino acid:
33
Cleavage Score (Cmax):
0.133
LipoP 1.0
Prediction:
CYT
Cleavage site amino acid:
0
Score:
-0.200913
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
No
Number of TMs:
0
PRED-TAT
Localization:
No signal peptide predicted
Score:
0.999
Predict Now
D6EG62
D6EG62_STRLI
SLIV_35935
Glutamate-1-semialdehyde 2,1-aminomutase
A,F1
Potential
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
ABC transporter ATP-binding subunit
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Potential
Predicted sub-cellular location:
Cytoplasmic, Peripheral plasma membrane protein fa
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EG47
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
No
Cleavage site amino acid:
22
Cleavage Score (Cmax):
0.167
LipoP 1.0
Prediction:
CYT
Cleavage site amino acid:
0
Score:
-0.200913
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
No
Number of TMs:
0
PRED-TAT
Localization:
Sec signal peptide predicted. Most likely cleavage site: 1- 19 [AKA-YG]
Score:
0.968
Predict Now
D6EG47
D6EG47_STRLI
SLIV_26195
ABC transporter ATP-binding subunit
A,F1
Potential
SToPS
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©2017 Copyright KU Leuven and FORTH/ICE-HT. Last Update: January 2019